| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6812 |
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| Symbol | sypC |
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| ID | 5152867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7092456 |
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| End bp | 7099568 |
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| Gene Length | 7113 bp |
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| Protein Length | 2370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561495 |
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| Product | arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase module |
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| Protein accession | YP_001242607 |
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| Protein GI | 148258022 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA GCGCAAATAC CCTGGAACAG CTGAGCGTTG CCGAGCGACT CGAATTGATT
GAGTTGGCGC GGTCTGGCGG CTTGAAAGCT AAGGGCGATC GAAGCCGGTT ACCCTCAATC
ACGCCAGCGG GACGTGAGGG GGCGCTGCCA TTATCGTTTG CGCAGCAGCG GCTGTGGTTT
TTGTCTCGTT TCGAGGGAAC GAGCACGGCG TATCACATCG CGGTCGGATT GCGGCTGATC
GGGCGGCTGG AGCGAGAGGC GCTGGTGCGG GCGCTGGACC GGATCGTGGC GCGGCACGAG
GCGCTGCGAA CGGTGTTCGT GCAAGGTGAT GATGGCATGC CGGTGCAGCG GATTGCTGCG
GCGGCGGGCT TTGCCTTGAG CGCGCACGAC CTATGTGGCG CGGCGGATGC GGCAGGCGAG
TTGCAGCGAC TGGTGGCTGT GGAAGCGACA GCGTCATTCG ATCTTGAGCG TGGTCCGCTG
ATCCGAGGCC GGCTGGTGCG GCTGGCGGCG GACGAGCACG TGGTGCTGGT GACGATGCAC
CACATCGTGT CGGACGGCTG GTCGATGGGC GTGCTGACGC GCGAGCTGAG CCAGCTATAT
GCGGCGTTCG TGCGCGGCGA GGCAGATCCG CTGCCGCCGC TCGCGATCCA ATATGGGGAC
TATGCGGTCT GGCAGCGGCG CTGGCTGTCG GGCGAAGTTC TGGCGCGCCG GGGTGCGTAT
TGGAAGGAGG CGTTGTCGGG CGCGCCTGCG CTTCTGGAAC TGCCCTGGGA CCGGCCGCGT
CCGGCGGAGC AGGACCATGC CGGGGCCGTG GTGCCGATCC GGTTGGATGC GAGGCTGACC
GAGGCATTGA AGGCGCTGAG CCATCGTCAC GGCACGACAT TGTACATGAC GCTGCTGGCA
GGCTGGGCGG CGCTGCTGTC GCGGCTGTCG GGGCAGAAGG ATGTGGTGAT CGGCAGCCCG
GTTGCGAACC GTGGACGAGC CGAGATCGAC GGGCTGATCG GGTTCTTCGT GAACACGTTG
GCGGTGCGCG TCGATCTGTC CGGCCCGCCG TCGGTGAGTG AGCTTCTGGC ACGGGTGAAG
GCGCAGACGG TGGCGGCGCA GGAGCACCAG GATCTGCCGT TCGAGCAGGT GGTTGAACTG
GTGCAGCCGT CGCGGAGCCT GAGTCACGCG CCGCTGTTCC AGGCGGTGCT GGTCTGGCAG
AACCTGCCGG CAGGACGTCT TGACCTTGGG GAGTTGCGGC TGGAAGCGGT GGAGGTGCCG
CGTGTGAGCG CGCAGTTCGA CCTGACGCTG AGCCTGGCTG AGACAGGTGG GACGATCAGC
GGCGGGCTGG AATATGCGAC CGCGCTGTTC GATCGCGGGA CGATCGAGCG CTGGGTCGGG
TACTTTGTCC GGCTGCTGGA AGGCATGGTG GCGGACGAGC ATGCGGAGGT GGATCGTCTG
CCGCTGCAGG GCGAGGCGGA GCGTCATCGC GTCCTGGTGG AGTGGAACGC GACGGCGGCG
GATTATCCGC AGGATGTGTG CGTGCACGAG TTGTTCGAGG CGCAGGCGGA GCGGACGCCG
GATGCGGTGG CGGTGGTGCA TGACGAGCGC CGGCTGAGCT ATGCGGAGCT GAACACCCAG
GCGAACCGGC TGGCGTATCA TCTGCGCAAG CTCGGCGTCA GGCCGGATGA CCGTGTTGCG
ATCTGCATCG AGCGTTCGAT CGAACTTGTC GCTGCGGAGC TGGCGATCCT CAAATGCGGC
GCAGCCTATG TGCCGCTGGA TCGCGACGTC CCGGCGGAAC GATTGGCGTT CATGATCAAG
GATTGCGAAG CATCCCTCGT GTTGATGGCA CGAGGCGCGG TGCTGCCGGA AGGGCTTGAG
GCCCACAGGA TCGATATCGA GGATATCCTG CGCGGTGCCG GAGACGCCCC CAATCCTGGC
TTGTCGCGGG ACAGCGGCAG TGATGCCTAC ATCATGTACA CGTCGGGCTC CACGGGAACG
CCCAAGGGAG TGGTGATTCC GCATCGAGCG ATCGGGCGGC TGGTGATCAA CAACGGCTAT
GCGGACTTCA ATGCGTCGGA TCGCGTTGCT TTTGCCGCCA ATCCTGCGTT TGACGCGACG
ACGATGGAGG TATGGGGGCC GCTGTTGAAC GGCGGATGCG TCGTGGTGAT CGACCAGGCG
TCGGTGCTGG AGCCCGAGCG GCTGGTCAGC GTCATGGAGC GGGATGGGGT CACGGTTCTG
TGGCTCACGG CGGGTCTGTT CCAGCAGTAT GCGGAGCTGC TCGGTGGCGT CTTCCGGCGA
CTGCGTTATC TGTTGGTGGG CGGCGACGTG CTGGATCCAC GGAGCATCCG TCATGTTCTC
CGGCACAGTC GTCCGCAATA TCTGCTGAAT GGCTACGGCC CGACGGAGAC GACGACGTTT
GCCATTACGC ATGAGATCAC CGAGGTCGAC GAACGTGCGA GCAGCATTCC ACTGGGCCGT
CCGATCTCGA ACACGCGGAT CTACATTCTT GACGCGTATG GCGATCCTGT GCCGATCGGG
GTTGCGGGCG AGATCTACAT CGGCGGAGCC GGCGTTGCGC GGGGCTATCT GAACCGTCCC
GAGCTGACGG CGGAGCGGTT CGTGGAGGAC CGGTTCTCGG GCGAGGCGGG CGCGCGGCTA
TATCGGACCG GGGATCTCGG GCGGTGGCTT GGCGACGGGA CGATCGCGTA TCTCGGGCGC
AACGACTTCC AGGTGAAGAT CCGCGGCTTC CGGATCGAGC TCGGAGAGAT CGAGGCGCGG
CTGTCGGAGC ATACGGGTGT GCGCGATGTC GCGGTGATCG CGCGGGAGGA TGTCGCGGGC
GACAAGCGTC TGGTGGCCTA CTATGTGGGC GACGCGGCGA TCGGGGCGGA GGAGCTGCGG
GGCCGTCTTG CGGCGCGGCT GCCGGACTAC ATGGTGCCGT CGGCCTATGT GCATCTCGAG
CGCCTGCCGC TGACGCCGAA CGGCAAGCTG GACCGCAAGG CGCTGCCGGC GCCGGAGGGG
GCTGCGTTTG CTGTGCAGGC CTACGAGCCG CCGCAGGGCG AGACCGAGGC GGCGATCGCC
CGGATCTGGG CGGAACTGCT CGGTGTCGAG CGTGTCGGGC GCCACGACAA CTTCTTCGCA
CTCGGCGGAC ACTCGCTGCT GGCGATGCAG GTGGTGTCAC GTTTGCGGCA GGCGCTGGCA
TTGGAAGTGG CGTTGTCAGG GTTTTTTGCG CGTCCGACAG TGTCAGAACT GGCAAACGGT
CTGAAGGATG CGGCCCCAAG CGGGTTGCCG TCGATCACGC CAGCGGGGCG TGAAGGGGCG
CAGCCACTGT CGTTTGCGCA GCAGCGGCTG TGGTTTCTGT CACGTTTCGA GGGAGCGAGC
GCGGCGTATC ACATAGCCGG TGGATTGCGG CTGATCGGGA GGCTTGAGCG AGAGGCGCTG
GTGTGCGCGC TGGACCGGAT CGTGACGCGG CACGAGGCGC TGCGGACCGT ATTTTATCAG
GGTGACGACG GCTTGCCGGT GCAGCAGGTT GCTGCGGCGG AGGCGGGCTT TGCCTTGGTG
CAGCACGACC TCCGGGGCAT GGCGGATACG GCAGGCGAGT TGCAGCGACT GGTGGCTGTG
GAAGCGACCG CGCCATTCGA TCTTGAGCGT GGTCCGCCGA TCCGGGGCCG GCTGGTGCGA
TTGGATGCCG ACGAGCATGT GCTGCTGGTG ACGATGCACC ACATCGTGTC GGACGGCTGG
TCGATGGGCG TGCTGACGCG CGAGCTGAGC CAGCTATATG CGGCGTTCGT GCGCGGCGAG
GCTGATCCGC TGCCGGCGCT CGCGATCCAA TATGGGGACT ACGCGGTCTG GCAGCGGCGG
TGGCTGTCGG GCGAGGGTCT GGCGCGCCAG GGCGCGTATT GGAAGGATGC GCTTGGGGGG
GCGCCTGCGC TTTTGGAGCT GCCGTGGGAC CGGCCGCGTC CGGCGGAGCA GAATTATGCC
GGAGCGATGG TGCCGGTGCG GCTGGATGGA GACCTGACGG GGGCCCTGAG GGCACTGAGC
CATCGTCACG GCACGACGTT GTACATGACG CTGCTGGCGG GCTGGGCGGC GCTGCTATCG
CGGTTGTCGG GGCAGGAGGA TGTGGTGATC GGCAGCCCGG TTGCGAACCG TGGACGAGCC
GAGATCGAGG GGCTGATCGG GTTCTTCGTG AACATGCTGG CGCTGCGTGT CGATGTATCG
GGCTCACCCT CGGTGAGTGA GCTTCTGGCA CGGGTGAAGG CGCAGACGGT GGCGGCGCAG
GAGCACCAGG ATCTGCCGTT CGAGCAGGTT GTGGAGCTGG TGCAGCCGTC GCGGAGCCTG
AGCCACGCGC CTCTGTTCCA GGTGGCGCTG GCCTGGCAGA CCATGTCGGC AGAGAATTTG
GATCTCGGGG AGCTGCGGCT GGCGCCGGTT GAGGTGCCGC GTGTGAGCGC GCAGTTCGAC
CTGACGCTGA GCCTGGCTGA GACAGGTGGG ACGATCAGCG GCGGGCTGGA ATATGCGACC
GCGCTGTTCG ATCGTGAGAC GATCGAGCGT TGGGTCGGGT ACTTTGTCCG GCTGCTGGAA
GGCATGGTGG CGGACGCGCG CGCGCCAGTG GATCGTCTGC CGCTGCAGGG CGAGGCAGAG
CGTCATCGTG TCCTGGTGGA ATGGAACGCG ACGGCTGCGG CTTATCCGCA GGATGTGTGC
GTGCACGAGC TGTTCGAGGC GCAGGCCGAG CGGACGCCGG ATGCGGTGGC GGTGGTGCAT
GAGGAGCGCC GGCTGAGCTA TGCGGAGCTG AACACCCAGG CGAACCGGCT GGCGCATCAT
CTGCGCAAGC TCGGCGTCAG GCCGGATGAC CGTGTTGCGA TCTGCATCGC GCGCAGCCCG
GAGATGATCG TGGGTCTGCT GGCGATCCTG AAGGCGGGCG GGGCCTATGT GCCGCTCGAT
CCGGCCTATC CGCCGGAGCG GCTGGCGTTC ATGCTTCAGG ACAGCGCGCC GGCGGCGCTG
CTGGTGGGCG GCGGCGCGCT GGATGTGCTG CCGGTCGTGG AGGCCGAGCT TGCGGCCAGC
GGCGTGCCGG TGCTCGACAT CGGCGCGGAT GCGGCGCAGT GGGCGGAGGC GCCCGCGCAT
AATCTGGAGC GGACCGAGAC CGGACTTGCG CCTGATCATC TCGCTTATGT GATCTACACG
TCCGGATCGA CCGGTCAGCC CAAGGGGGTG ATGGTCGAGC ACCGCGGTCT CGCCAACCTG
GTGCATTGGC ACTGCGAGGC CTTCGCGCTG CGTCCGGGGA CGCACAGCTC CTTAGTAGCT
GGTTTGAGCT TTGATGCTTC GAGCTGGGAA GTGTGGCCGG CGCTGTGTTG CGGCGGCGTA
CTGGTGGTGC CGCGGCCTGA GACGGCGCGG GATCCCGAAG CGCTGATGGC CTGGTGGCAG
ACGCAGCCGC TGGACGTGAG CTTCCTGCCG ACACCGATGG CGGAGTTTGT GCTGTCGCAG
GGGCTCGTGA ACCGGCATCT GCGTGTTCTG CTGACGGGGG GCGACCGTTT GCGGAAGCTG
CCCAAGGCGC TGCCATTCGC GCTGGTGAAC AATTACGGTC CCACGGAAAC GACGGTGGTG
GCCACGTCCG GTTTGCTCGG GGCTGATGAG GCGGTGCTGC ATATCGGCCG TCCGATCTCG
AACACGCATA TCTACATATT GGATGCGTAT GGGGAGCCGG CGCCGATCGG TGTCGCGGGC
GAGATCTATA TCGGCGGGGC CGGAGTTGCG CGGGGCTATC TGAACCGTCC CGAACTGACG
GCGGCGCGGT TCGTGGAGGA TCGCTTCTCG GGCGAGGCCG GGGCGCGGCT GTACCGGACC
GGGGATCTCG GTCGGTGGCT TGGCGACGGG ACGATCGCGT ATCTCGGTCG TAACGACTTC
CAGGTAAAGA TCCGCGGCTT CCGGATCGAG CTCGGGGAGA TCGAGGCGCG GCTGTCGGAG
CATGCGGGTG TGCGCGATGT CGCAGTGGTC GCGCGGGAGG ATGCTCCGGG CGACAAGCGC
CTGGTGGCTT ACTATGTGAG CGACGCGGCG ATCGGGGCCG AGCAGCTGCG GGGCCATCTT
GCGGCGCGGC TGCCGGACTA CATGGTGCCT GCGGCGTATG TCCATCTGGA TCGGCTGCCG
TTGACGCCGA ACGGCAAGCT CGACCGCAAG GCGTTGCCGG CGCCGGAAGG AACAGCGTTC
GCGGCGCAGG CCTATGAGCC GCCGCAGGGC GAGACCGAGG AGGTCATCGC CCGGATCTGG
TCGGAGCTGC TGGGCGTTGA GCGGATCGGG CGACACGACA ATTTCTTCGC GCTCGGCGGA
CACTCGCTGC TTCTGGCCAA GATGCAGGTG AGATTAAGTC AAGCCGGTTT ATCCCTATCG
ATCCCGCGAA TTTTTGCAAA TCCAACGATT GCCAGTCTCC TCCAGAACGA CGGCAATTCA
CCCACTCTCG ATTTCGAATC GCACGTGGTT GAGCTTCGCT CGCCCGCGGC TACGGAGGCG
AAGCCACTCT TCATCATGAG CCAGGGCCAG GGAAGCGTGT TGTACGGAGC TAAGCTGGCA
GCACGACTTC CCGATGGCTT TCCGATTTAC GGTCTGACAA GCGACGGACA AAGACGGGAT
CATCTGCGAA CTGTGGAAGA TATCGCAGCC TGCTTTGTGG CCATCATCAA GCAAATCCAA
CCCGCCGGTC CTTACCGCCT GGCAGGGTGG TCGTTCGGGG GTAAGCTGGC CTACGAAGTC
GCTCGTCAAC TTCTGTCGGC CCATAACGAC GTTCAATTCG TTGGCCTTAT CGATACCTAT
TACAGGAGAC CGACTTGGAT TTCCGAAGAG GTGATGGATC GCTTTCTCTC ATCGCTCAGT
CCGGCGTTAA GGCAGACGAC ACGCCGGTTG ATAAACGCCG ATAATGTGTA TGAAAGCGAA
TATATTCCGA TCAAGATATG TCTATTTGTG GCAGAGGCCC CGAATGAAGA TGCGCATAGA
GGATGGAAAG AGGTGTTGCC TGAGCATCAG ATTGTTACCA TTCAGATACC CGGGGCACAT
GATGACGTCA TGTCTGATGG CAACATTGAG GTGCTGGTGC AGAGTTTGAG CGAGCAATTG
CTGACGTGCG ATGAGACGGG GCAGATAGGC TGA
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| Protein sequence | MNQSANTLEQ LSVAERLELI ELARSGGLKA KGDRSRLPSI TPAGREGALP LSFAQQRLWF
LSRFEGTSTA YHIAVGLRLI GRLEREALVR ALDRIVARHE ALRTVFVQGD DGMPVQRIAA
AAGFALSAHD LCGAADAAGE LQRLVAVEAT ASFDLERGPL IRGRLVRLAA DEHVVLVTMH
HIVSDGWSMG VLTRELSQLY AAFVRGEADP LPPLAIQYGD YAVWQRRWLS GEVLARRGAY
WKEALSGAPA LLELPWDRPR PAEQDHAGAV VPIRLDARLT EALKALSHRH GTTLYMTLLA
GWAALLSRLS GQKDVVIGSP VANRGRAEID GLIGFFVNTL AVRVDLSGPP SVSELLARVK
AQTVAAQEHQ DLPFEQVVEL VQPSRSLSHA PLFQAVLVWQ NLPAGRLDLG ELRLEAVEVP
RVSAQFDLTL SLAETGGTIS GGLEYATALF DRGTIERWVG YFVRLLEGMV ADEHAEVDRL
PLQGEAERHR VLVEWNATAA DYPQDVCVHE LFEAQAERTP DAVAVVHDER RLSYAELNTQ
ANRLAYHLRK LGVRPDDRVA ICIERSIELV AAELAILKCG AAYVPLDRDV PAERLAFMIK
DCEASLVLMA RGAVLPEGLE AHRIDIEDIL RGAGDAPNPG LSRDSGSDAY IMYTSGSTGT
PKGVVIPHRA IGRLVINNGY ADFNASDRVA FAANPAFDAT TMEVWGPLLN GGCVVVIDQA
SVLEPERLVS VMERDGVTVL WLTAGLFQQY AELLGGVFRR LRYLLVGGDV LDPRSIRHVL
RHSRPQYLLN GYGPTETTTF AITHEITEVD ERASSIPLGR PISNTRIYIL DAYGDPVPIG
VAGEIYIGGA GVARGYLNRP ELTAERFVED RFSGEAGARL YRTGDLGRWL GDGTIAYLGR
NDFQVKIRGF RIELGEIEAR LSEHTGVRDV AVIAREDVAG DKRLVAYYVG DAAIGAEELR
GRLAARLPDY MVPSAYVHLE RLPLTPNGKL DRKALPAPEG AAFAVQAYEP PQGETEAAIA
RIWAELLGVE RVGRHDNFFA LGGHSLLAMQ VVSRLRQALA LEVALSGFFA RPTVSELANG
LKDAAPSGLP SITPAGREGA QPLSFAQQRL WFLSRFEGAS AAYHIAGGLR LIGRLEREAL
VCALDRIVTR HEALRTVFYQ GDDGLPVQQV AAAEAGFALV QHDLRGMADT AGELQRLVAV
EATAPFDLER GPPIRGRLVR LDADEHVLLV TMHHIVSDGW SMGVLTRELS QLYAAFVRGE
ADPLPALAIQ YGDYAVWQRR WLSGEGLARQ GAYWKDALGG APALLELPWD RPRPAEQNYA
GAMVPVRLDG DLTGALRALS HRHGTTLYMT LLAGWAALLS RLSGQEDVVI GSPVANRGRA
EIEGLIGFFV NMLALRVDVS GSPSVSELLA RVKAQTVAAQ EHQDLPFEQV VELVQPSRSL
SHAPLFQVAL AWQTMSAENL DLGELRLAPV EVPRVSAQFD LTLSLAETGG TISGGLEYAT
ALFDRETIER WVGYFVRLLE GMVADARAPV DRLPLQGEAE RHRVLVEWNA TAAAYPQDVC
VHELFEAQAE RTPDAVAVVH EERRLSYAEL NTQANRLAHH LRKLGVRPDD RVAICIARSP
EMIVGLLAIL KAGGAYVPLD PAYPPERLAF MLQDSAPAAL LVGGGALDVL PVVEAELAAS
GVPVLDIGAD AAQWAEAPAH NLERTETGLA PDHLAYVIYT SGSTGQPKGV MVEHRGLANL
VHWHCEAFAL RPGTHSSLVA GLSFDASSWE VWPALCCGGV LVVPRPETAR DPEALMAWWQ
TQPLDVSFLP TPMAEFVLSQ GLVNRHLRVL LTGGDRLRKL PKALPFALVN NYGPTETTVV
ATSGLLGADE AVLHIGRPIS NTHIYILDAY GEPAPIGVAG EIYIGGAGVA RGYLNRPELT
AARFVEDRFS GEAGARLYRT GDLGRWLGDG TIAYLGRNDF QVKIRGFRIE LGEIEARLSE
HAGVRDVAVV AREDAPGDKR LVAYYVSDAA IGAEQLRGHL AARLPDYMVP AAYVHLDRLP
LTPNGKLDRK ALPAPEGTAF AAQAYEPPQG ETEEVIARIW SELLGVERIG RHDNFFALGG
HSLLLAKMQV RLSQAGLSLS IPRIFANPTI ASLLQNDGNS PTLDFESHVV ELRSPAATEA
KPLFIMSQGQ GSVLYGAKLA ARLPDGFPIY GLTSDGQRRD HLRTVEDIAA CFVAIIKQIQ
PAGPYRLAGW SFGGKLAYEV ARQLLSAHND VQFVGLIDTY YRRPTWISEE VMDRFLSSLS
PALRQTTRRL INADNVYESE YIPIKICLFV AEAPNEDAHR GWKEVLPEHQ IVTIQIPGAH
DDVMSDGNIE VLVQSLSEQL LTCDETGQIG
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