Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6784 |
Symbol | |
ID | 5155815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7067033 |
End bp | 7067653 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640561467 |
Product | LysE family amino acid efflux protein |
Protein accession | YP_001242580 |
Protein GI | 148257995 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0400664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGC AAGTCTATCT CGCCTTCGTC GCCGCCTGCA TCGCGCTGGC GCTGCTGCCC GGACCCGTCG TCACGCTGCT GATCGCCAAC GGGCTGCGTC ATGGAACCCG CGCCGCGCTG ATCAACATCG CCGGCGTCCA GACCGGGCTG GCGATCGCGA TCGGCATCGT CGCGATGGGT CTGACGACAC TGATGGCGAC GATGGGCTAC TGGTTCGAAT GGGTACGCCT GATCGGCGCC GCCTATCTGG TCTGGCTCGG CATCCAATTG ATCCGCTCGC CGGTCGAGGG TATCGCCGAA GGCGAGGCGC CGCCCCCGCC GCCGCGCGGC GGCTTCTTCC TGCAGGGCCT GCTGGTGCTG CTGTCGAACC CGAAGGTCAT GGTGTTCTTC GGGGCCTTCC TGCCGCAGTT CATGGACATG AGCCGCGATC ACGTGCCGCA GGTCGCGCTG CTCGGCGTCA CCTTCATGGT GGTCGCCGGC CTCACGGATG CGATCTACGC GTTGCTCGCC GGTCGTGCGC GAAAGCTGTT CTCGGCGCGG CGCACCCGGC TGGTCTCCCG CATCTCCGGC GGCTTCATGA TCGGCGGTGG CGTGTGGCTG GCCCTGACGC GGGCACGATA G
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Protein sequence | MSLQVYLAFV AACIALALLP GPVVTLLIAN GLRHGTRAAL INIAGVQTGL AIAIGIVAMG LTTLMATMGY WFEWVRLIGA AYLVWLGIQL IRSPVEGIAE GEAPPPPPRG GFFLQGLLVL LSNPKVMVFF GAFLPQFMDM SRDHVPQVAL LGVTFMVVAG LTDAIYALLA GRARKLFSAR RTRLVSRISG GFMIGGGVWL ALTRAR
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