Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6762 |
Symbol | |
ID | 5154114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7045383 |
End bp | 7046618 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561446 |
Product | diguanylate cyclase |
Protein accession | YP_001242559 |
Protein GI | 148257974 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.322015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAACG TTCCGACGCT GTGGACCGCC TTCGTGGTCA ACTTCCTCGC ACTGGGCCTG ATCTGGGCCT ATGTGATGCG GAGCTACCCC AATCTGGCAT CGGCGCGCTA CTGGACAGCC TCTGCGTTCA TGTGCGCGCC GGCCGCCTTG TGCGCGCTGG GCCAATTCTA TTTCGGCTCC TTCATGCCCC TGCTCGCCGG CGCCTCGCTG ATGACGCTCG CGATCTGCCT CGCGGCGATG GGCGTGCAGC GCTTCTATGG CCGTGCAGCC TCGTGGCGAC TGAGCCTCTC CGTGGTCGCG CTGACCTGCA CGTCGATCGC CTTCTTTCTC TATGTCTACG ACCACGGACC GCTACGGATC CTGTGCTACT CGCTCGGGCA GGCGGTCCCG ATGGCGGTGA TCGCGCGGCT GGTGCTGGAC GCCAGAAACG GACCCATCAA TCCAGGGGCG CGACTCGCCG GATTGCTGTC GGTCCTGATC ATCGCCGTGT TCGCGGCGCG GACGATCGGC GCCTTTATTG GCGCGGACTT CAATTTCAGT CATTCCACCA GCGGCCAGGC CGCTGCGGTG CTGTTGCTGA TCTTTCTGTC GATGTCGCTC AATTTCGGTT TTCTGCTGAT GGCCGTCGAC CGCCTGCGCA ACGAGGTCGC CGATCTCGCG CTGCTCGACG ATCTCACCGG CGTCGCCAAT CGGCGCCATC TGATGCAGCG GCTCGGCGAG GAGTGCGCGC GCGCAGAGCG GTCGGGAAAA CCGTTCGCGC TGCTGGTGAT CGATCTCGAC GGCTTCAAGC TCATCAACGA CAATCACGGT CATGCGGCGG GCGATGCCTG CCTGCAGCAC TTCACGCTGA TGGCGCAGAC CCGGCTCAGG CCGGGTGACA TGCTTGCGCG CACCGGCGGC GACGAGTTCT GCATCCTGCT GCCGTCGTCC TCTTTGCGGG AGGGCGCGAT GATCGCGCGA CGGATCCTGC AGGTCTGCCG CGACGATGCA GAGGCCTGCG CCGGAGCCGA CGTGCCGATC GAGGTGTCGA TCGGCGTGGC CGAGTGGACG CGGGACCTCG GTGCATTCCC GGACCGGGTG ATGGCGCGGG CGGACCAGGC GCTGTATGCG GCCAAGAAGG ATGGCAAGAA CCGTTATGCC GTTTACCAAA ACGAGGTCGA TGCGCCCAGC TTGGCCCCGG AGCAGATCGC CGCGTTGGCC CTGCATCACC CGCGCCAGGA TGCTGCCGCC GAATAG
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Protein sequence | MLNVPTLWTA FVVNFLALGL IWAYVMRSYP NLASARYWTA SAFMCAPAAL CALGQFYFGS FMPLLAGASL MTLAICLAAM GVQRFYGRAA SWRLSLSVVA LTCTSIAFFL YVYDHGPLRI LCYSLGQAVP MAVIARLVLD ARNGPINPGA RLAGLLSVLI IAVFAARTIG AFIGADFNFS HSTSGQAAAV LLLIFLSMSL NFGFLLMAVD RLRNEVADLA LLDDLTGVAN RRHLMQRLGE ECARAERSGK PFALLVIDLD GFKLINDNHG HAAGDACLQH FTLMAQTRLR PGDMLARTGG DEFCILLPSS SLREGAMIAR RILQVCRDDA EACAGADVPI EVSIGVAEWT RDLGAFPDRV MARADQALYA AKKDGKNRYA VYQNEVDAPS LAPEQIAALA LHHPRQDAAA E
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