Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6682 |
Symbol | |
ID | 5154410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6957707 |
End bp | 6959410 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640561371 |
Product | hypothetical protein |
Protein accession | YP_001242485 |
Protein GI | 148257900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGAGC AAACGGCCGA ACAGACCAGC CTTGGCATTG CCTCTCTTGG CGTCGCCGGA GCTGAGCCGG CGCTGAAGAC CTCGGCGTCC CCCGATGTTG TCGATATCGC CGTGCCGGCG ATCGCTCCGG CCGCACAGCC GATGATCGCG CCCGATCACG AGGCCCCCGG CGCCGATCAC CCGGCAGTCG AGGTCAAGGC CGAGGCCATC AAAGCCGAGT CGCTGAAGAC CGAAATTGGC AAGACGGAGC CGAAGCGACT GGATCTGGTC AAATCCGACA AGCCGAGGCT GGAGCCGGTC AAGGTCGATG CCGCTCCGAC GCCCGTCAAC GCGAGCGCTC CCAAGTCACC CGCGACCATC CTTGACCTGA TCAGGACCGA GCCTGTCAAA TCGGAGCCTC TCAAGACCAG CGCCGCCACG GGTGAGCTGC TCAAGGTTGA GACACCCAAG CTGTCCATGC TCGCGGCAAA CGCCCCGAAG ATCGGATCGA TGGCAGCCGC CGCGCCGAAG CCTGAGGCTC AAGTGAAGGC TGAGACCCAA GTCAAGGCTG CAGCTGGCGC AAAGCCGGAC GGCTCCGTCA CGCCAGTGGT GACCGCCAAG ACCGAGCCGT TTGCAAAGCC CGATGTTTCC GTCAAGGCGG AGGCCAAGGT GGAGGCTGCA GCCAAGGTCG AGACGAAGTC CGAGCCTGTG GCGAAGCCTG ACACGGCGGC GCAGCGCCCG AATGGTCCGC GTGACGCGAA GGCGGAGCCA ACCAGCACCA AGGCTGGCGC GGTGTTCGAC AAAGCGACGG CCTGGGCCAA ATCGAACTTG GCGTCGAAGT TCAAGGCCGA GCCGTTCAAA TTCAATGCGA GCTCCAAAGC GCCGACGACG GCCGAGGCGC CTGCTATCGC GATCCTGTCG CAATCGGGAA AGCCAGCATC CGCTCCGCTC GCCCCCGCTG GCAGGCTCCG CCTGCCGGCC GTTGCCGCGA CAGTGCTGCT GGCGATGGTG GTCGGCGGCG TGGCCGGTGG CCTGGTGACT GCAACCCTGA TCAGCCCCCC CAACGCGGCG ACCGTGGGGG ACACGGCGGG CGCCACGTCG GATCCGACGC TCGCAGCCAC CGTGTCGCGG ATCGATAATG ATGTCGCCGC GCTCAAGGCC AGCCTGGAGC AGACCAACCA GACCAGTCTC GTCGAACTGA ACAAATCCGC CGAGCGCCTG GACCGGCTCG AGAAAGTGCT GGGCGAGCTG TCGACCAAGT CGACGGGCAA GCCGAGCGAG CTGCAGCGGC TGAGCGACGC CGTCGAACGG CTGCGCGCGG CGCAGGCGTC GGCGACCGCG CAGCCGGCAG CCCGCGACAA TACGGCGCCG GGGCAGCAGG CCGTCGGGGC CATCAATGCT GCCGCGCCGC CTGCCGGAGT GGCGAGCCGC CAGGAGGCGA ACCGGGCCGA GGCGCCGAGA GCGGACACGA GCCGGGCCGA GGCCGCGCGC GCCGAGGCAC CGAGGGCCGA GGCCAACCGC GCCGACACCG CCAAGCTGCG CGTGCTCGAT GGCTGGGTCC TGCGCGATGT CGGTCGTGGC GGCGCGTTGA TCGAGGGCCG CGGCGGTCTG TACGAGGTCT ATGCGGGCGA TCCCGTGCCG GGTCTCGGCA AAGTGGATGC GATCCGAAAG CAGGACGGCC GCTGGGTGGT CGTCACCACC AAGGGACTTG TCGTTTCGCG CTGA
|
Protein sequence | MSEQTAEQTS LGIASLGVAG AEPALKTSAS PDVVDIAVPA IAPAAQPMIA PDHEAPGADH PAVEVKAEAI KAESLKTEIG KTEPKRLDLV KSDKPRLEPV KVDAAPTPVN ASAPKSPATI LDLIRTEPVK SEPLKTSAAT GELLKVETPK LSMLAANAPK IGSMAAAAPK PEAQVKAETQ VKAAAGAKPD GSVTPVVTAK TEPFAKPDVS VKAEAKVEAA AKVETKSEPV AKPDTAAQRP NGPRDAKAEP TSTKAGAVFD KATAWAKSNL ASKFKAEPFK FNASSKAPTT AEAPAIAILS QSGKPASAPL APAGRLRLPA VAATVLLAMV VGGVAGGLVT ATLISPPNAA TVGDTAGATS DPTLAATVSR IDNDVAALKA SLEQTNQTSL VELNKSAERL DRLEKVLGEL STKSTGKPSE LQRLSDAVER LRAAQASATA QPAARDNTAP GQQAVGAINA AAPPAGVASR QEANRAEAPR ADTSRAEAAR AEAPRAEANR ADTAKLRVLD GWVLRDVGRG GALIEGRGGL YEVYAGDPVP GLGKVDAIRK QDGRWVVVTT KGLVVSR
|
| |