Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6672 |
Symbol | |
ID | 5154319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6946355 |
End bp | 6947149 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640561362 |
Product | putative short-chain dehydrogenase/reductase |
Protein accession | YP_001242476 |
Protein GI | 148257891 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.157918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTGA CCGGCAAGAT CGTGGTGGTC ACCGGCGGAG CCCGGGGCAT CGGCAAGGCG CTGTGCGAGG CCTTTGCGCG GGCCGGCGCG GCCAAGGTGA TCGTGGCCGA CCTCGACGAG ACTGCAGCGA AGGCGGTTGC CGAGAGCGTC GGGGGCGCGG CGTTCAAATG CGATGTCTCG CAGGAAACCG ACATCAGCCG TGTGATCGAG GAGACCGAGC GGCAGTTCGG CCCGATCGCG CTGTTCTGCT CCAACGCCGG CATCGGCGGC GGATTCGATC CGCTCGCGGT GAATGTCGGA GGCACGACGG ATGAGCCGTG GGCGCGCAGC TGGGCGATCC ATGTGATGGC GCATGTTTAC GCGGCGCGGC ACCTGATCCC GCGCTACAAG GCTCGCGGTG GCGGCTATTT CCTCAACACG ATCTCGGCGG CTGGCCTGCT GTCGCAGGTC GGCAGCGCGC CTTATTCCAC CACCAAGCAC GCCGCGGTGG GATTCGCCGA GAATCTCGCG ATCTCGCACA AGGCTGACAA CATCAAGGTC TCGATCCTGT GCCCGCAGGG CGTCGACACC GACATGCTGC GGTCGATCCC GAAGGGCCCG CAATCCGGTG ACGGCGATCT GACGCCCGAG CAGGTGGCGC AGGATGCGCT GAAGGGGCTC GCTGAAGAGA CATTTCTGAT TTTGCCGCAT CCGCAGGTGC TCGGCTATAT GCGCAAGAAG ACCGAGAATT ACGATCGCTG GCTCGGCGGC ATGGCCAAGA TCCAGGCCAA GATGCGCGAA GAGTTCGGCA AGTAA
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Protein sequence | MQVTGKIVVV TGGARGIGKA LCEAFARAGA AKVIVADLDE TAAKAVAESV GGAAFKCDVS QETDISRVIE ETERQFGPIA LFCSNAGIGG GFDPLAVNVG GTTDEPWARS WAIHVMAHVY AARHLIPRYK ARGGGYFLNT ISAAGLLSQV GSAPYSTTKH AAVGFAENLA ISHKADNIKV SILCPQGVDT DMLRSIPKGP QSGDGDLTPE QVAQDALKGL AEETFLILPH PQVLGYMRKK TENYDRWLGG MAKIQAKMRE EFGK
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