Gene BBta_6641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6641 
Symbol 
ID5150080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6909492 
End bp6910520 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content70% 
IMG OID640561333 
Productanaerobic benzoate catabolism transcriptional regulator 
Protein accessionYP_001242447 
Protein GI148257862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.451308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.130059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA TCAGACCCCT TCAGCGCCGC TCGGCGCCGC CGCAGGACCA GCGCCAGGAC 
AGCTTCCCCG TGGCAGGCGA GGCGGTCCCC GATCGGTTCC TCAGCGAGCT CGGCGCGCGC
GTGCGCACGA TGCGCGCGGT GCGAGGGATG TCCCGCAAGG TGCTGGCCCA GACCTCCGGC
GTGTCAGAGC GCTACATCGC CCAGCTCGAA AGTGGCCAGG GCAATGTCTC GATCATGCTG
CTGCGCCGGC TCGCCGAGGT CGCCGGCGTC CAGCTCGAGG ATCTCGTTGC CGATCCCGCC
GGCCGGCCGA AGGATTGGGT GCTGATCCGC GAACTGCTGA TGCAGGCGCC GCCGGTCGTG
ATCGACGACG TCAAGGCGCT GCTGACGGGC CGCCCGCTCG ATCGGCCGAC CCAGACTGCC
AACATCCAGG TCGATCGCGT CGCGCTGATC GGGCTGCGCG GCGCCGGCAA ATCGACGCTC
GGACGATTGC TGGCCGAGCA GCTCGGCTGG CGCTTTGTCG AGCTCAACCG CGAAATCGAG
CGGGACGCCG GCTTCTCCGT CAGCGAGGTG TTCTCGCTCT ACGGCCAGGA CGCCTATCGC
CGGTTCGAGC AGGCCGCGCT GGCGCGCATC GTCGCGGAGC CCGGGCCCAT GGTGCTCGCC
GTGGGCGGCG GCATCGTGTC GGATCCGGTC ACCTTCGAGC GCCTGCTCGC CGAGTACTTC
TGTATCTGGA TCAAGGCCAG CCCGACCGAG CACATGGAGC GGGTCCGTGC GCAGGGCGAT
GTCCGGCCGA TGGCCGACGA CAGCAGCGCG ATGAGCGAGC TCGTCACCAT CCTGAAGAGC
CGCGAGGCCC TGTACGCGCG GGCCCGCGCC TCGCTCGATA CGTCGGGCGC CCGCGTCGGG
GACTCGGTGC AGGCGCTGCT CCGGATGGTC CGCAATTATT GCACCGCCGG CTGCCCCTAT
GTGGCCCGCA ATCGCATCGC GGCAGCGGGC GCGAACGGGC CGGTATGCGA GGCGGCCGCG
GAGCGCTAG
 
Protein sequence
MSRIRPLQRR SAPPQDQRQD SFPVAGEAVP DRFLSELGAR VRTMRAVRGM SRKVLAQTSG 
VSERYIAQLE SGQGNVSIML LRRLAEVAGV QLEDLVADPA GRPKDWVLIR ELLMQAPPVV
IDDVKALLTG RPLDRPTQTA NIQVDRVALI GLRGAGKSTL GRLLAEQLGW RFVELNREIE
RDAGFSVSEV FSLYGQDAYR RFEQAALARI VAEPGPMVLA VGGGIVSDPV TFERLLAEYF
CIWIKASPTE HMERVRAQGD VRPMADDSSA MSELVTILKS REALYARARA SLDTSGARVG
DSVQALLRMV RNYCTAGCPY VARNRIAAAG ANGPVCEAAA ER