| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6606 |
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| Symbol | |
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| ID | 5155224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6883673 |
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| End bp | 6885547 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640561301 |
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| Product | putative Phage / plasmid primase P4 |
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| Protein accession | YP_001242415 |
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| Protein GI | 148257830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACC ACGACGACGA CAACGTGCCA CCGCACGAGC AAATCGCGGC ATGGATCGAG
GGCGATCACG ACGCCGATCT CTCGGGCTTC GCCGCCGCCT CCTATGCCCC GCACCCCGCC
GATGGGGGGT CCAATTTTGA AGGGGCAGGC GAGGAGGATG TCGCGCCGGC TGATGACGAG
CGGCCCGCCG ACGCCGATAC GTTGCCGCGC GAAATCATCG TCGCGTGCTC GCACGAGCCG
CAAAACGACA CCGGCAACGG CAAGCGCTTG TTGCAATGGT TCGGCGCCGA TCTCGTGCAT
GTGCGTGATA TGGGCTGGCA CGCGTGGGTC GGGACGCATT GGGAACGCGA GGGCGGGATC
GAGGCGGCAA CACGTTGCGC GCAAAAGGTG GCCGAGCGCA TCGTGCTTGA GGCCGACGTG
ATGGCCGCGA CACCGAACGA ACAGAAGGCC ATTGACGCCG CGAGCCAAGC CCGAGACGCG
GCGGGAGCGA TCGAGGCAGC CAAGGGCGCC GAGGCGCGCA AAGATCAGCG CTGGCAAATG
CTGATGCGTG TTGTGGCCGC CGGCGAGGCC GCGCAAACCG CCTTGGCGAG CCGCCAAGTC
GCCCGCCGCA AATACGCGAT CTCAAGCGGC AACGCGGCCA AGGTGCGCAA CATGCTCGAT
CAGGCGATGC CGCATCACAC GATCGAGATC GACAAACTCG ACGCTGATAA GCTGGCGTTC
AACGTGCGCA ACGGCACGCT CTGCTTTGTC GCCGACGAGA TGCCCGATCC CGACGCGAGC
GATCACTCTA ACCAGGTGCT CAAGAGGTGG CGCGTCGAGT TTCGTGAGCA TAACCGTGCG
GACTACATGA CAAAGGTCGC GCCGGTTGAC TATGATCCGA AAGCGAAGTG CCCGACGTTC
GATGCCTCGT TGCGGCGGTT TCAGCCGAGC GCGGACATCA GGCGGTTTTT GCAGCGCTAT
CACGGCTATG CTTTGACCGG CCTCACGGGC GAGCAATGCT TGATCTTCAA CTATGGTGGC
GGATCGAACT GGAAATCGAC GTTTGTCGAA CTGATGTGCC GCATCAGCGG CCCATACGCG
CAAACGATCC CGTTCGAATC GATCTCGGGC GACGTGCAAA AGAGCGGATC GCAGGCGTCC
CCGGAGTTCG CGCGCTTGCC CGGTTGCCGG CTGTTGCGCG CCGGCGAGCC CGATCCGAAC
GTGCAATTCA AAGAGGGGCT GATCAAGTCA TTAACAGGCG GCGAGCCGAT GCTCACGCGG
GCTAATTTCA AGGACTTTTT CGAGTTCCGG CCCGACTTCA AGATCGTGCT ATCAGGTAAT
CACAAGCCGA AAATCTCCGG CGTCGATCAC GGCATTTGGC GCCGTATCAA CCTCGTGCCT
TGGGGGATCA CGATCGCGGA TCACGAAAAG CGGCCGATGC CCGACGTGCT CGCCGAGCTA
ATGGCCGAGG CGAGCGGCAT CCTCAATTGG CTCGTCGCCG GCACGCTCAA CTACTTGAAC
GGCGGATTGA AGCCGCCGCC CGAGGTTGTC GCGGCTACTG CGGCCTATCG TGAGCGTATG
GACCCGGTGG GCGCGTTTGT CGGGCAATGT GTCACGGTGT TGCCGCCGCC GGCCGCGCAC
GCCGGCGCGG CGTTCGTGCC GGCGCGGCAG ATGTACGGCG CCTTTGTCGC GTGGTGCTCG
GTCAACGAGC AAAAGCCATG GGGCGAAAAG GCGTTCGCCG GCGTGATGGA AGAAAAGGGG
TTTGAGCGGC ACCGATCCAA CGCCGGCATG CGCTACCTGA ATGTGCAGCT GCATGACGTG
CCCGAGCGCG ACGGCATGGG CCGAGACGAC GTTCCGCCGC ATCCTGGCGC CGACGACGCG
CCCGTTCCCG TGTAG
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| Protein sequence | MTNHDDDNVP PHEQIAAWIE GDHDADLSGF AAASYAPHPA DGGSNFEGAG EEDVAPADDE
RPADADTLPR EIIVACSHEP QNDTGNGKRL LQWFGADLVH VRDMGWHAWV GTHWEREGGI
EAATRCAQKV AERIVLEADV MAATPNEQKA IDAASQARDA AGAIEAAKGA EARKDQRWQM
LMRVVAAGEA AQTALASRQV ARRKYAISSG NAAKVRNMLD QAMPHHTIEI DKLDADKLAF
NVRNGTLCFV ADEMPDPDAS DHSNQVLKRW RVEFREHNRA DYMTKVAPVD YDPKAKCPTF
DASLRRFQPS ADIRRFLQRY HGYALTGLTG EQCLIFNYGG GSNWKSTFVE LMCRISGPYA
QTIPFESISG DVQKSGSQAS PEFARLPGCR LLRAGEPDPN VQFKEGLIKS LTGGEPMLTR
ANFKDFFEFR PDFKIVLSGN HKPKISGVDH GIWRRINLVP WGITIADHEK RPMPDVLAEL
MAEASGILNW LVAGTLNYLN GGLKPPPEVV AATAAYRERM DPVGAFVGQC VTVLPPPAAH
AGAAFVPARQ MYGAFVAWCS VNEQKPWGEK AFAGVMEEKG FERHRSNAGM RYLNVQLHDV
PERDGMGRDD VPPHPGADDA PVPV
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