Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6487 |
Symbol | kdgD |
ID | 5156242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6760658 |
End bp | 6761599 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561186 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_001242302 |
Protein GI | 148257717 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.603765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA TGACCCCCCA GGAAATGGCT GCGAAAATCG GCAGCGGCCT GCTCTCCTTC CCCGTGACGC CGTTCAAGGC CGACTATTCG TTCGACGAGG CCACCTATCG CGCCAACATG GACTGGCTGT GCGGCTACGA GGTCGCCGGC CTGTTCGCCG CCGGCGGCAC CGGCGAGTTC TTCTCGCTGA CCCCGGCCGA AGTGCCTGAG GTGGTGCGGG TCGCCGTCGA CGAGACCCGC GGCCGCGTGC CTGTGCTGGC CGGCACCGGC TACGGCACCG CCATCGCGCG CGAGATCGCC ATCGGTGCGG AGAAGGCCGG CGCGGACGGC CTGCTGCTGC TGCCGCCCTA TCTGACCCAT GCCGAGCAGG ACGGCCTCGC CGCCCATGTC GAGGCGGTCT GCAAGTCCGT GAAGATCGGC GTCATCGTCT ACAATCGCGA CAACGCGATC CTGCAGCCAG ACACTCTGGC GCGGCTGTGC GAGCGCTGCC CGAACCTGGT CGGCTACAAG GACGGCATTG GCGACATCGA GCTGATGACC CGGGTCTACA GCAAGATGGG CGACCGCCTG ACCTATATCG GCGGCCTGCC GACGGCGGAA ACCTTCGCGC TGCCCTATCT CGACATGGGC GTGACGACCT ACTCGTCGGC CGTGTTCAAC TTTGTGCCGG AGTTCGCGAC GAATTTCTAT GCCGCAGTGC GCAAGCGCGA CCATGCCACC ATCCATGCCG GATTGAAGGA TTTCATTTTG CCGCTGATCG CGATACGCAA CCGCAAGAAG GGTTACGCGG TCTCGATCAT CAAGGCCGGC ATGAAGGTCA TCGGCCGCGA TTCCGGCCCG GTCCGCCTGC CGCTGACCGA TCTCACCGAA ACCGAGATGG CGGAGCTGAC CGCGCTGGTG AAGGCGCTGC CGGCAGCGGC GGTGAGCCAG GCGGCGGAGT AA
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Protein sequence | MSKMTPQEMA AKIGSGLLSF PVTPFKADYS FDEATYRANM DWLCGYEVAG LFAAGGTGEF FSLTPAEVPE VVRVAVDETR GRVPVLAGTG YGTAIAREIA IGAEKAGADG LLLLPPYLTH AEQDGLAAHV EAVCKSVKIG VIVYNRDNAI LQPDTLARLC ERCPNLVGYK DGIGDIELMT RVYSKMGDRL TYIGGLPTAE TFALPYLDMG VTTYSSAVFN FVPEFATNFY AAVRKRDHAT IHAGLKDFIL PLIAIRNRKK GYAVSIIKAG MKVIGRDSGP VRLPLTDLTE TEMAELTALV KALPAAAVSQ AAE
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