Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6455 |
Symbol | |
ID | 5154530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6727101 |
End bp | 6728045 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640561155 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_001242271 |
Protein GI | 148257686 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.871345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGAT TTAAGCTCCT CGCCGTAACG GCCGCCCTCC TGGCCTCGAC CACAGCGTTT GCTGACGACG TCAAGGTCGG CATCGGCATT TCCGGCTGGA CCGGCTTCGC GCCGCTGACG CTCGCCAAGG AAGCGGGCAT CTTCAAGAAG AACGGGCTCG ACGTCACCAT CAAGAAGATC CCGCAGAAGG ACCGTCACCT CGCAATTGCT GCCGGCGACG TGCAGTGCGC CGCGACCACG GTCGAGACCT GGATCTCCTG GAACGCCAAC GGCGTCGCCA CCAAGCAGAT CTTCCAGCTC GACAAGAGCT ACGGCGCCGA CGGCATGGCC GTGCGCAACG ACATCGCCTC GATCAAGGAC CTGAAGGGCA AGACGGTCGC GGCGTCGGCG CCCGGCACCT CGCCCTATTT CGGGCTGGCC TGGATGCTCA AGAAGAACGG TCTCACCGTC AAGGACGTCA CGATCGTGAA CCTGGAGCCG GCGGCGGCCG CGCAGGCCTT CGTCTCCGGC CAGAACGATG CGGCCATGAC CTACGAGCCA TATCTGTCGA CGGTGCGCGC CGCGCCGGAC AAGGGCAAGA TCATCGCCAC CACGCTCGAT TATCCGATGG TGATGGATAC GTTCGGCTGC ACGCCGAAAT TCCTCTCCGA GAACCCGAAG GCCGCCAAGG CGCTCGCCGA CAGCTATTAC GAGGCACTCG ACCTGATCGC CAAGGACCAG GCCAAGGCCT ATGAGATCAT GGGCGCCGAC GTGAAGCAGA CGGCCGAGCA GTTCGGCAAC TCCGCCAAAT ATCTGCGCTG GCAGGATAAG GCCGCGAGCC AGAAGTTCTT CGAGACCGAG TTCAAGACCT TCAACAAGGA CGCGGCGGAG CTCCTGCTCG AGGTCGGCAT CATCAAGCAG ATCCCGAACG TCGAGGATCT CTATGATGCG AGCTTCATCA AGTAG
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Protein sequence | MRRFKLLAVT AALLASTTAF ADDVKVGIGI SGWTGFAPLT LAKEAGIFKK NGLDVTIKKI PQKDRHLAIA AGDVQCAATT VETWISWNAN GVATKQIFQL DKSYGADGMA VRNDIASIKD LKGKTVAASA PGTSPYFGLA WMLKKNGLTV KDVTIVNLEP AAAAQAFVSG QNDAAMTYEP YLSTVRAAPD KGKIIATTLD YPMVMDTFGC TPKFLSENPK AAKALADSYY EALDLIAKDQ AKAYEIMGAD VKQTAEQFGN SAKYLRWQDK AASQKFFETE FKTFNKDAAE LLLEVGIIKQ IPNVEDLYDA SFIK
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