Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6450 |
Symbol | hutU |
ID | 5154927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6720351 |
End bp | 6722021 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561150 |
Product | urocanate hydratase |
Protein accession | YP_001242266 |
Protein GI | 148257681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAC GCCTGGACAA TGAACGGGTG ATCCGCGCCC CCCATGGCAG CGACATCAGC GCCAAGAGCT GGCTCACCGA AGCGCCGCTG CGCATGCTGA TGAACAATCT CGATCCCGAT GTCGCCGAGA AGCCGAGCGA GCTGATCGTC TATGGCGGCA TCGGCCGCGC CGCGCGCGAC TGGGACAGTT TTGATCGCAT CGTCGCCTCG CTACGCAAGC TTGAAGCCGA CCAGACCCTG GTAGTGCAGT CCGGCAAGCC GGTCGGCATC TTCCGGACCC ACCCCGATGC GCCGCGCGTG CTGATCGCCA ATTCCAACAT CGTGCCGCAT TGGGCGACGC TCGATCACTT CAACGCGCTC GATCGCATGG GCCTGATGAT GTACGGCCAG ATGACGGCCG GCTCCTGGAT CTATATCGGC AGCCAGGGCA TCGTGCAGGG CACCTATGAG ACCTTCGTCG AGGTCGGCCG TCGCCACTAC CATGGCGATC TCGCCGGCAA ATGGATCCTG ACCGCCGGCC TTGGCGGCAT GGGCGGCGCG CAGCCGCTGG CGGCGACGAT GGCCGGCGCG TCGATGCTGG CTGTCGAATG CCAGCCGAGC CGCATCGAGA TGCGGCTGCG CACCGGCTAT CTCGACCGCC AGGCTGCCTC GCTCGACGAG GCGCTGGCGC TGATGGCCGA AGCGGCGGTG ACGAAGCAGG CGGTGTCGGT CGGCCTGCTC GGCAACGCCG CCGAGATCTT CCCGGAACTC GTGCGTCGCG GCGTGCGGCC GGACATCGTC ACCGACCAGA CCAGCGCGCA TGATCCGATC AACGGCTATC TGCCCAAGGG CTGGACGCTC GCCGAATGGG AGATGAAGCG TGCCTCTGAC CCGAAGGCAG TGGAGCAGGC CTCGAAGACC TCGATGGTCG GCCATGTCCA GGCGATGCTG GATTTCCACG CCATGGGCAT TCCGACGCTC GACTACGGCA ACAACATCCG CCAGATGGCG AAGGACATGG GCCTCGCCAA CGCGTTCGAC TTCCCCGGCT TCGTGCCGGC CTATATTCGC CCGCTGTTCT GCCGCGGCAT CGGCCCGTTC CGCTGGGCCG CCTTGTCGGG CGATCCCGAG GACATCTACA AGACCGACGC CAAGGTCAAG GAGCTGTTGC CGGACAACAA GCACCTGCAC AATTGGCTCG ACATGGCGCG GCAACGCATC AAGTTCCAGG GCCTGCCGGC GCGGATCTGC TGGGTCGGGC TCGGCGACCG GCATCGCCTC GGGCTCGCCT TCAACGAGAT GGTGGCGCGC GGCGAGGTGA AGGCGCCGAT CGTGATCGGC CGCGACCATC TCGATTCCGG CTCGGTGGCG AGCCCGAACC GCGAGACCGA GGCGATGAAG GACGGCTCGG ATGCGGTATC GGACTGGCCG CTGCTGAATG CGCTGCTCAA TTGCGCCAGC GGGGCGACCT GGGTGTCGCT GCATCATGGC GGCGGCGTCG GCATCGGCTA TTCGCAGCAT GCCGGCATGG TGATCGTGGC CGATGGTACG CCCGATGCCG CGCGGCGGCT GGAGCGCGTG CTGTGGAACG ATCCCGCCAC CGGCGTGATG CGCCACGCCG ATGCCGGCTA TGAGGATGCG ATCGCCTGCG CCGACGTTAA TGGTCTCGAT CTGCCGAGTT TGGCGCGATA G
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Protein sequence | MNRRLDNERV IRAPHGSDIS AKSWLTEAPL RMLMNNLDPD VAEKPSELIV YGGIGRAARD WDSFDRIVAS LRKLEADQTL VVQSGKPVGI FRTHPDAPRV LIANSNIVPH WATLDHFNAL DRMGLMMYGQ MTAGSWIYIG SQGIVQGTYE TFVEVGRRHY HGDLAGKWIL TAGLGGMGGA QPLAATMAGA SMLAVECQPS RIEMRLRTGY LDRQAASLDE ALALMAEAAV TKQAVSVGLL GNAAEIFPEL VRRGVRPDIV TDQTSAHDPI NGYLPKGWTL AEWEMKRASD PKAVEQASKT SMVGHVQAML DFHAMGIPTL DYGNNIRQMA KDMGLANAFD FPGFVPAYIR PLFCRGIGPF RWAALSGDPE DIYKTDAKVK ELLPDNKHLH NWLDMARQRI KFQGLPARIC WVGLGDRHRL GLAFNEMVAR GEVKAPIVIG RDHLDSGSVA SPNRETEAMK DGSDAVSDWP LLNALLNCAS GATWVSLHHG GGVGIGYSQH AGMVIVADGT PDAARRLERV LWNDPATGVM RHADAGYEDA IACADVNGLD LPSLAR
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