Gene BBta_6450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6450 
SymbolhutU 
ID5154927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6720351 
End bp6722021 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content66% 
IMG OID640561150 
Producturocanate hydratase 
Protein accessionYP_001242266 
Protein GI148257681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC GCCTGGACAA TGAACGGGTG ATCCGCGCCC CCCATGGCAG CGACATCAGC 
GCCAAGAGCT GGCTCACCGA AGCGCCGCTG CGCATGCTGA TGAACAATCT CGATCCCGAT
GTCGCCGAGA AGCCGAGCGA GCTGATCGTC TATGGCGGCA TCGGCCGCGC CGCGCGCGAC
TGGGACAGTT TTGATCGCAT CGTCGCCTCG CTACGCAAGC TTGAAGCCGA CCAGACCCTG
GTAGTGCAGT CCGGCAAGCC GGTCGGCATC TTCCGGACCC ACCCCGATGC GCCGCGCGTG
CTGATCGCCA ATTCCAACAT CGTGCCGCAT TGGGCGACGC TCGATCACTT CAACGCGCTC
GATCGCATGG GCCTGATGAT GTACGGCCAG ATGACGGCCG GCTCCTGGAT CTATATCGGC
AGCCAGGGCA TCGTGCAGGG CACCTATGAG ACCTTCGTCG AGGTCGGCCG TCGCCACTAC
CATGGCGATC TCGCCGGCAA ATGGATCCTG ACCGCCGGCC TTGGCGGCAT GGGCGGCGCG
CAGCCGCTGG CGGCGACGAT GGCCGGCGCG TCGATGCTGG CTGTCGAATG CCAGCCGAGC
CGCATCGAGA TGCGGCTGCG CACCGGCTAT CTCGACCGCC AGGCTGCCTC GCTCGACGAG
GCGCTGGCGC TGATGGCCGA AGCGGCGGTG ACGAAGCAGG CGGTGTCGGT CGGCCTGCTC
GGCAACGCCG CCGAGATCTT CCCGGAACTC GTGCGTCGCG GCGTGCGGCC GGACATCGTC
ACCGACCAGA CCAGCGCGCA TGATCCGATC AACGGCTATC TGCCCAAGGG CTGGACGCTC
GCCGAATGGG AGATGAAGCG TGCCTCTGAC CCGAAGGCAG TGGAGCAGGC CTCGAAGACC
TCGATGGTCG GCCATGTCCA GGCGATGCTG GATTTCCACG CCATGGGCAT TCCGACGCTC
GACTACGGCA ACAACATCCG CCAGATGGCG AAGGACATGG GCCTCGCCAA CGCGTTCGAC
TTCCCCGGCT TCGTGCCGGC CTATATTCGC CCGCTGTTCT GCCGCGGCAT CGGCCCGTTC
CGCTGGGCCG CCTTGTCGGG CGATCCCGAG GACATCTACA AGACCGACGC CAAGGTCAAG
GAGCTGTTGC CGGACAACAA GCACCTGCAC AATTGGCTCG ACATGGCGCG GCAACGCATC
AAGTTCCAGG GCCTGCCGGC GCGGATCTGC TGGGTCGGGC TCGGCGACCG GCATCGCCTC
GGGCTCGCCT TCAACGAGAT GGTGGCGCGC GGCGAGGTGA AGGCGCCGAT CGTGATCGGC
CGCGACCATC TCGATTCCGG CTCGGTGGCG AGCCCGAACC GCGAGACCGA GGCGATGAAG
GACGGCTCGG ATGCGGTATC GGACTGGCCG CTGCTGAATG CGCTGCTCAA TTGCGCCAGC
GGGGCGACCT GGGTGTCGCT GCATCATGGC GGCGGCGTCG GCATCGGCTA TTCGCAGCAT
GCCGGCATGG TGATCGTGGC CGATGGTACG CCCGATGCCG CGCGGCGGCT GGAGCGCGTG
CTGTGGAACG ATCCCGCCAC CGGCGTGATG CGCCACGCCG ATGCCGGCTA TGAGGATGCG
ATCGCCTGCG CCGACGTTAA TGGTCTCGAT CTGCCGAGTT TGGCGCGATA G
 
Protein sequence
MNRRLDNERV IRAPHGSDIS AKSWLTEAPL RMLMNNLDPD VAEKPSELIV YGGIGRAARD 
WDSFDRIVAS LRKLEADQTL VVQSGKPVGI FRTHPDAPRV LIANSNIVPH WATLDHFNAL
DRMGLMMYGQ MTAGSWIYIG SQGIVQGTYE TFVEVGRRHY HGDLAGKWIL TAGLGGMGGA
QPLAATMAGA SMLAVECQPS RIEMRLRTGY LDRQAASLDE ALALMAEAAV TKQAVSVGLL
GNAAEIFPEL VRRGVRPDIV TDQTSAHDPI NGYLPKGWTL AEWEMKRASD PKAVEQASKT
SMVGHVQAML DFHAMGIPTL DYGNNIRQMA KDMGLANAFD FPGFVPAYIR PLFCRGIGPF
RWAALSGDPE DIYKTDAKVK ELLPDNKHLH NWLDMARQRI KFQGLPARIC WVGLGDRHRL
GLAFNEMVAR GEVKAPIVIG RDHLDSGSVA SPNRETEAMK DGSDAVSDWP LLNALLNCAS
GATWVSLHHG GGVGIGYSQH AGMVIVADGT PDAARRLERV LWNDPATGVM RHADAGYEDA
IACADVNGLD LPSLAR