| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6393 |
|---|
| Symbol | |
|---|
| ID | 5153824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6659057 |
|---|
| End bp | 6659746 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640561093 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001242209 |
|---|
| Protein GI | 148257624 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0255151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA CGCTGGCCAA GGTTAAGCGA AGTGCCGTAG CGCGGGATGC CGTGCGCGGT
CGGGTGGGCC GGCCTCCGAA GGCATTGGCC GGCGACATCG AAGCGCGGAT CCTGGATGCC
GCGCGCGAGG TTTTCCTGGA GCGCGGTTTC GACGGCACCA GCATCGATGA GATCGCGGAA
CGGGCGCCGG CGTCCAAACC GACCATCTAT GCGCGATACT CCGGCAAGCC GGCCTTGTTT
GCGGCCATCA TCGAGCGCTC CCTCAATGAA CTGATGAATT TCGGCTCCTA CACGGCGCCC
GCCGGAACTG TTCAGGAGAA ACTGGTCGGG CTGGCGACGA CCATCGTCAA TCGCGGGTTG
AAGGAGACGC TCGGCCTGTT GCGCGTAACG ATCGGAGAGG CCTATCGCTT TCCCGATCTC
AGCTGCGAGG TTCACGAGGT CACGCGCAAA CGTGCGGCGC ACGCGGTGGC CGTGCTGCTG
GCCGAAACGT TTCGCTCCCC CGGAAGCGGG GCGAGACGCC CGCCTGCAAA GGCCTGGGAG
GCCTCTGCGG AGATCTTCAT CGATCTGACC GTCCTGCCGC TGATGATGCG CGCGCTGATG
GGATTGGACG AGAAAACCCT TCGCAAGCAG ATGCCCGTCT TCATTCGCGA GCGGGTCAAG
ATCTTCCTCG CCCTGCAAGG CAAGGATTAG
|
|---|
| Protein sequence | MARTLAKVKR SAVARDAVRG RVGRPPKALA GDIEARILDA AREVFLERGF DGTSIDEIAE
RAPASKPTIY ARYSGKPALF AAIIERSLNE LMNFGSYTAP AGTVQEKLVG LATTIVNRGL
KETLGLLRVT IGEAYRFPDL SCEVHEVTRK RAAHAVAVLL AETFRSPGSG ARRPPAKAWE
ASAEIFIDLT VLPLMMRALM GLDEKTLRKQ MPVFIRERVK IFLALQGKD
|
|---|
| |