| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6335 |
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| Symbol | kdpD |
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| ID | 5152730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6597632 |
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| End bp | 6600349 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640561042 |
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| Product | sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation |
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| Protein accession | YP_001242159 |
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| Protein GI | 148257574 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0342372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGTC AACGCCGCGA TCCTGACCAA CGTCCCTCGC CGGAAGCCCT GCTCGAAGCA
GCCCGGCGGG AGGACAGTCC TGCCGGCAAG CTCAAGATTT TCGTCGGCGC CGCCCCCGGC
GTCGGCAAGA CCTATGAGAT GCTGTCGAGC GCGCATGCCA AGCTGAAGGC CGGCATCGAC
GTCGTCATCG GCTTTGTCGA GACCCATGGC CGCGCCGAGA CCGAGGCGCT GGTGCGTGGC
CTCGAAGTGA TCCCCCGCAA GCGCATCGTC TACAGGGACC AGGTCATCGA GGAGATGGAC
CTGGACGCCG TGATCGCGCG GCGGCCGAAG CTCGCGATCG TCGACGAGCT GGCCCATACC
AACGCCGCCG GCAGCCGGCA TCCGAAGCGC TATCTCGACG TCGAGGAACT GCTGTCGCAC
GGCGTCGACG TCTACACCGC CGTCAACGTC CAGCACATCG AGAGCCTCAA CGACGTCGTC
GCGCAGATCA CCCATGTGCG GGTGCGCGAG ACCGTGCCCG ATTCGATCCT CGACCGCGCC
GATGCGATCG AGTTGATCGA CCTCACGCCC GACGATCTGA TCCAGCGGCT GAAGGAGGGC
AAGGTCTATG TGCCCAAACA GGCCGAGCGC GCGCTGGAGC ATTATTTCTC GCCCGGCAAC
CTGACCGCGT TGCGTGAGCT GGCGCTGCGC CGGACCGCCG AGCGCGTCGA CGAGCAGCTG
CTCAACCATA TGCAGGCGAA CGCCATCGCC GGACCCTGGG CGGCGGGCGA GCGCATCCTC
GTCTGCGTCT CCGAGGATCC GCGTGCCGCC GGCCTGGTGC GCTACACCAA GCGGCTCGCC
GATCGCGTCC ATGCTCCGTG GACCGCGGTC ACGATCGAGA CGCGGCGCAA CCTCCAGCTC
TCGGACAAGC AGCGTGATCG CCTCGCCGAT ACGCTGCGGC TGGCCGAGAC GCTGGGCGGC
GAGGCGCTGA CGATCCCCGG CGTCGGCCGC CGCATCGCCG ACGATCTCAT CGGCTTCGCG
CAGGCCAACA ACGTCACCCA GATCATCATC GGCAAGTCGC AGCGCTCGCG CCTGTTCGAG
ATCATCAGGG GATCGGTGGT GCATGATCTG GTGCGACGTG CCGGCAACAT CAGTATTCAC
GTCATTCCCG GCGAGGAGTC GACCGAGCTC GCGAGCCCGT CCGTCCAGAT GCGCGCTCGC
AGCGAGCCGA TGCGGCCAAA GCCCTATGTG ATGGCGCTGC TGATCACGGC GGCGGGCCTC
GGCCTCGCCG AACTGATCCA GCCGTTCTTC GGCATCGAGA ATGTCGACCT CGTCTTCCTC
ACCGCGGTGG TCGGCGTCGC CGCGCGCTAC GGCCTGTGGC CGTCGCTGCT GGCGAGCGTC
GTCGCCTCGC TGTGCTACAA TTTCTTCTTT CTGCCGCCGC TCTATACGTT CACGATCACC
GATCCGACCA ACGTGGCGGC GTTCTTCTTC TTCATGTTGA TCGCGCTGCT GGTGTCCAAC
GTCGCAGCCC GGGTGCGCGT GCAGGCTGAC ACGGCGACCC AGCGCATCCG CACCACCGAA
CAGCTCTACG CGTTCAGCCG CAAGCTGGCA GGCACGGCGA CGCTCGACGA CGTGTTGTGG
GCGACTGCCT ATCAGGCGGC TTTGATGTTG AAGGTCCGGG TCGTGCTGCT GCTGCCACAG
GACGGCAAGC TCACCGTGAT GGCCGGCTAT CCGCCGGAGG ATCAGCTCGA CGACGCCGAC
CTCGCCGCGG CCAGCTGGGC CTGGAGCAAC GACCGCGTCG CCGGCCGCGG CTCCGACACG
CTGCCCGGCG CCAAGCGCCT GTTCCTGCCG ATGCGCACCG GGCGCGGTTC GATCGGGGTC
ATCGGCATCG ATGACGACCG CACCGGCCCG CTGCTGACGC CCGATCAGCG CCGGCTGCTC
GACGCGCTGG TCGACCAGGG CGCGCTCGCG ATCGAGCGCG TGCTGCTGGT CGAGGACATG
GACAAGGTCA AGCGCACGAT GGAGCAGGAC CGGTTGCGCT CGGCGCTGCT GACCTCGATC
TCCCATGATC TGAAGACGCC GCTCGCCTCC GTGCTCGGCG CCGCCTCGAC GATGCGCGAT
CTCGCGACCC GGCTGTCGGA CCGGGAGAAG CTCGATCTGC TCGCGACCGT GATCGATGAA
TCCGAGCGGC TCAACCGCTT CATCGCCAAC CTGCTCGACA TGACCAAGCT CGAATCTGGC
GCGATCAAGC CGAACACCGC CCTGCACGAT CTCAGCGAAA TTGTCGGCAG CGCGCTACGG
CGCGCGAGCA AGATCCTTGC CGGTCACCGG GTGTCGCTCG ATCTGGCCGC TGATCTGCCG
ATGGTCGAGG TCGATGCGGT GCTGTTCGAG CAGGTCCTGT TCAATCTGCT CGACAACGCC
GCAAAATATG CGCCTGCCGA CACGTCGATT GCGATCCGTG CTGCGCGCGA TGGCAACTGG
GTCGTGCTGG ACGTCCGTGA CGAAGGCGAC GGCATTCCCG CCGCCGAGAT CGAGCACGTG
TTCGACAAGT TCTATCGGGT GCAGAAGGGC GACCAGGTGC GCCCCGGGAC GGGGCTGGGG
CTTGCGATCT CGCGTGGCTT CATCGAGGCG ATGCATGGCC GCATCTTCGC CGGCAACCGC
ACCGATCGGC GCGGCGCGAT CCTCACCATC CGCCTGCCGG TGCCGGCGCA GGCCAAACCG
CTGGATACGG CCGCATGA
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| Protein sequence | MASQRRDPDQ RPSPEALLEA ARREDSPAGK LKIFVGAAPG VGKTYEMLSS AHAKLKAGID
VVIGFVETHG RAETEALVRG LEVIPRKRIV YRDQVIEEMD LDAVIARRPK LAIVDELAHT
NAAGSRHPKR YLDVEELLSH GVDVYTAVNV QHIESLNDVV AQITHVRVRE TVPDSILDRA
DAIELIDLTP DDLIQRLKEG KVYVPKQAER ALEHYFSPGN LTALRELALR RTAERVDEQL
LNHMQANAIA GPWAAGERIL VCVSEDPRAA GLVRYTKRLA DRVHAPWTAV TIETRRNLQL
SDKQRDRLAD TLRLAETLGG EALTIPGVGR RIADDLIGFA QANNVTQIII GKSQRSRLFE
IIRGSVVHDL VRRAGNISIH VIPGEESTEL ASPSVQMRAR SEPMRPKPYV MALLITAAGL
GLAELIQPFF GIENVDLVFL TAVVGVAARY GLWPSLLASV VASLCYNFFF LPPLYTFTIT
DPTNVAAFFF FMLIALLVSN VAARVRVQAD TATQRIRTTE QLYAFSRKLA GTATLDDVLW
ATAYQAALML KVRVVLLLPQ DGKLTVMAGY PPEDQLDDAD LAAASWAWSN DRVAGRGSDT
LPGAKRLFLP MRTGRGSIGV IGIDDDRTGP LLTPDQRRLL DALVDQGALA IERVLLVEDM
DKVKRTMEQD RLRSALLTSI SHDLKTPLAS VLGAASTMRD LATRLSDREK LDLLATVIDE
SERLNRFIAN LLDMTKLESG AIKPNTALHD LSEIVGSALR RASKILAGHR VSLDLAADLP
MVEVDAVLFE QVLFNLLDNA AKYAPADTSI AIRAARDGNW VVLDVRDEGD GIPAAEIEHV
FDKFYRVQKG DQVRPGTGLG LAISRGFIEA MHGRIFAGNR TDRRGAILTI RLPVPAQAKP
LDTAA
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