Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6325 |
Symbol | |
ID | 5153301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6585074 |
End bp | 6586843 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561032 |
Product | putative maltooligosyltrehalose trehalohydrolase |
Protein accession | YP_001242149 |
Protein GI | 148257564 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.174281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGGC GTCAATTCGG ACCGCGGCTA TCCGAGCATG GCACCAGTTT CCGACTGTGG GCGCCCGCGG CCAGGCGCGT CGATCTGGTG CTCGATGATG GCAGGCGCGA GATGCAACGC CGTGACGGCG GCTGGTACGC GCTTGACGCT CCGGGCATTG GGGCCGGCAC CCGCTACAAG TTCCGCATCG ACGACGAGCT CGACGTGCCC GATCCCGGTT CGGATTTTCA GCCCGAGGAC GTCTCGGGTC CGAGCGAGGT GATCGACCAC TGCGCCTACG TCTGGCGCGC CAAGGACTGG CGCGGCCGGC CGTGGCAGGA TGCGGTGTTC CTCGAAAGCC ACGTCGGCAC CTTTACCGAA GAGGGCACCT ATCGCGCGAT GATCGACAAG CTCGATCATC TCGTCGAGAC CGGCATCACC GCGCTGGAAC TGATGCCGCT CGCGGACTTC GCCGGGCGCC GCAACTGGGG CTATGACGGT GTTCTGCTCT ACGCGCCGGA CAGCGTCTAT GGCCGCCCCG ACGATCTGCG CGCGCTGATC GACGAGGCGC ATCTGCGCGG GCTGATGGTG TTCCTCGACG TCGTCTACAA TCACTTCGGA CCGGAAGGAA ACTATATCGC CCGCTACGCG CCGACCTTCT TCACCGATAC GCATACGCCG TGGGGGAGCG CCATCGACTA TCGGCGGCCC GAAGTGCGCG CCTTCGCGAT CGAGAATGCG CTGCATTGGC TGACCGATTA TCGCTTCGAC GGGCTGCGCT TCGACGCCGT CAACCATATC CTCTCCAACG AGGGTGAGAT CCCGATGCTG CACGAGCTGA GCGCCGCGGT CGGCAGGCTC GTCGCGCAGA CCGGGCGGCA CATCCATCTC GTGCTGGAAA ATGGCGACAA CCGCGCCAGC ATGCTCGACG CGGCGGAAGA GCCGCCGCGT GGTAAATTCC GCGCGCAGTG GAACGACGAC TATCATCACG TCTGGCACGT CATGCTGACG GGCGAGACCA CAGGCTATTA CGGCGACTAC CAGGACAACC CGCGTGGCGG CCTCGCACGC GCACTCGCCT CCGGCTTTGT CTATCAGGGC GAGCAGGCGG CGTTCTGGGG CGGCATCCGG CGGGGTGAGC CGAGCGGTCA TCTCGCCCCC GGCGCCTTCG TGAACTTCCT GCAGAACCAT GACCAGATTG GCAACCGCGT GTTCGGCGAC CGGCTCGAAG CGCTGGCGCC GCCGGAAGGT ATTGCCGCGG CCCTTGCCGT CACGCTGCTC GCGCCGACCG TGCCGATGCT GTACATGGGC GAGGAGTGGG GCTCGAAGCA GCCGTTCCCG TTCTTCTGCG ATTTCCAGGG CGATCTCGCC CACGCCGTCC GCAAGGGACG CCGCAAGGAA TATGAATGGG CGTACGCCAA ATATGGCGAC GAGGTTCCCG ACCCGCTCGA CGTTGAGACG TTCAGATCTG CGATCATCGA CTGGGATGCG CGCAACGAAC CGCCCGGTCG CGAGCGGCTG GCGCTGGTGC GCGATCTCCT CGCCGTGCGG CACAGCAAGG TGGCACCGCT TCTGCCTGGA GCGACCTTCG GCGCAGCCGA TGTGACCGAT GAGGGCCGCC TGACCGCACA TTGGACGATG GGTGATGGCA GCCAGCTGCG GCTTCTCGCC AACGTCTCGG ACAAGGAGAT CGCCGGACCA TCCAACGACG TCAACGGCAC GCCGATCTGG GGCGGCACGC CGGGTGATCG CCTGCCGCCC TGGTCCGTGT ACTGGAGCAT CGGAGGATAA
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Protein sequence | MSGRQFGPRL SEHGTSFRLW APAARRVDLV LDDGRREMQR RDGGWYALDA PGIGAGTRYK FRIDDELDVP DPGSDFQPED VSGPSEVIDH CAYVWRAKDW RGRPWQDAVF LESHVGTFTE EGTYRAMIDK LDHLVETGIT ALELMPLADF AGRRNWGYDG VLLYAPDSVY GRPDDLRALI DEAHLRGLMV FLDVVYNHFG PEGNYIARYA PTFFTDTHTP WGSAIDYRRP EVRAFAIENA LHWLTDYRFD GLRFDAVNHI LSNEGEIPML HELSAAVGRL VAQTGRHIHL VLENGDNRAS MLDAAEEPPR GKFRAQWNDD YHHVWHVMLT GETTGYYGDY QDNPRGGLAR ALASGFVYQG EQAAFWGGIR RGEPSGHLAP GAFVNFLQNH DQIGNRVFGD RLEALAPPEG IAAALAVTLL APTVPMLYMG EEWGSKQPFP FFCDFQGDLA HAVRKGRRKE YEWAYAKYGD EVPDPLDVET FRSAIIDWDA RNEPPGRERL ALVRDLLAVR HSKVAPLLPG ATFGAADVTD EGRLTAHWTM GDGSQLRLLA NVSDKEIAGP SNDVNGTPIW GGTPGDRLPP WSVYWSIGG
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