| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6271 |
|---|
| Symbol | |
|---|
| ID | 5151158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6518061 |
|---|
| End bp | 6519206 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640560979 |
|---|
| Product | putative amino-acid ABC transporter, periplasmic substrate-binding protein |
|---|
| Protein accession | YP_001242096 |
|---|
| Protein GI | 148257511 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCCG CTGTCGCTGT GCTGGGCATG GCCTTGACGA TGATGCTCGC CGCGCCGGCG
CGGGCCGACA TCAAGGTCGG TATCGTGGTG TCCGCGACCG GGCCCGGCTC GGCGCTGGGA
CAGCCGCAGA TCAAGGCGGT CGCCGCGCTG CCGAAGGAGA TCGGCGGCGA GAAGATCGTC
TACATCGCGC TCGACGACGA GTCCGACAGC GTCAAGGGCC TGCAGAACGC GCGGCGCCTG
GTCATCCAGG ATGGCGTCGA CGTCATCATC GGCTCGTCGC TGACCCCGGT CACCATGCCG
ATGCTCGACG TCGCGCTGGA AAGCAGGACG CCGCTGCTGT CGCTGGCGGC CTCGACCGCA
ATCGTGCAGC CGATGGACGA CAAGCGCAAA TGGGCGTTCA AGGTCGTGCC CAATGACGAC
ATCATGGCGG CGGCGATGCT CAAATACATC GCCAAGAGCG GGGTGAAGAC GCTCGGCTTC
ATCGGCGTCT CCGACGGCTA TGGCGAGGGC TACTATCAGG AGGTCACGAA GCTCGCGCCG
AAGCTCGGCC TCACCGTGAC CACCCACGAG GTCTATGCGC GCGGCGACAC CAGCGCGATG
GGCCAGGCGC TCAAGGTGAT CGCCACCAAT CCGGACGCGG TGTTCATTGC CTCCGCCGGC
ACGCCGGCCG TGCTGCCGCA GCAGGCGCTG CGCGAACGCG GCTATGCCGG CAAGATCTTC
CAGACCCATG GCGTGGCGAC GCAGGAGTTC ATCAAGCTCG GCAAAGAGAA TGTCGAGGGC
GCGATCTTCG CCGGCGAGGC GTTCTCGATC GCCGACGATC TCGCCGCCGA GGATCCGTTC
CGCCGCGCCA ACGATGCGTT CGTCGCCGCC TACCAGGCCG CCAATGGCGA CAGACCGAAC
ATCTTTGCCG CGCATCTGTG GGACACGGTG ACGCTGCTCA AGGGCGCGAT CCCCGGCGCG
CTGGAGGCCG CCAGGCCCGG CACCGCGGAC TTCCGCACCG CCCTGCGCGA CGAGCTGGAG
CGCGGCAAGG ACGTCTATCT CAACAACGGC CTCTCCAACA TGAGCCCGAC CGACCACAAC
GGCTATGACG AACGCTCGGC ATTCCTGATC AAGGTCGAGG GCGGGCGCTT CAGACTTGTG
AAGTAG
|
|---|
| Protein sequence | MRAAVAVLGM ALTMMLAAPA RADIKVGIVV SATGPGSALG QPQIKAVAAL PKEIGGEKIV
YIALDDESDS VKGLQNARRL VIQDGVDVII GSSLTPVTMP MLDVALESRT PLLSLAASTA
IVQPMDDKRK WAFKVVPNDD IMAAAMLKYI AKSGVKTLGF IGVSDGYGEG YYQEVTKLAP
KLGLTVTTHE VYARGDTSAM GQALKVIATN PDAVFIASAG TPAVLPQQAL RERGYAGKIF
QTHGVATQEF IKLGKENVEG AIFAGEAFSI ADDLAAEDPF RRANDAFVAA YQAANGDRPN
IFAAHLWDTV TLLKGAIPGA LEAARPGTAD FRTALRDELE RGKDVYLNNG LSNMSPTDHN
GYDERSAFLI KVEGGRFRLV K
|
|---|
| |