Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6264 |
Symbol | plcN |
ID | 5150937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6507821 |
End bp | 6509950 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560973 |
Product | non-hemolytic phospholipase C precursor |
Protein accession | YP_001242090 |
Protein GI | 148257505 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.339495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.82782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA CGATCGCGCA TAACCGGCGC GAGTTCTTGC GGCTGCTGGG TGCGTCGGCC GCCACTGCGG CGCTCAGCCA GAGCATCGAG CGGGCCCATG CCATTCCGGC CTTCAATCGC CATGGCAGCA TCGAGGACGT CAAGCACATC GTGGTGCTGA TGCAGGAGAA CCGCGCGTTC GACCATTATT TCGGCGCGAT GCGTGGCGTG CGTGGCTTCA ACGATCCGCG CGCCGTCAAG CTGCCGAATG GCAATCCGGT CTGGCAGCAG CCGAACGGCA CCGGATCGGT CATGCCGTTC CGGGTCGACA ATGCCGGTTC GGTCTATGTC GAGGACGTCG CCCATGGCTG GAACGACGGC CAGAAGGCCT GGAACAACGG CAATTACGAC AAGTGGATCG CCAATAAGGG CACCACGACG ATGACCTGCA TGAACCGGCA GGATCTGCCC TGGCACTACG CACTCGCCGA CGCATTCACG ATCTGCGATC AGTATTTCTG CTCGGTGATG GGACCGACCG ATCCGAACCG CTATTATTTG TGGACCGGCT GGGACGGCAA TGACGGCAAG AATGGCGGTC CGGTCATCAC CAATGCCGAG GCGGGTTACG ACTGGACCAC GTTCCCGGAG CGGCTCGAGA AGGCCGGCAT CTCCTGGAAG GTCTATCAGG ACATCGGCAC GGGGCTGGAT GCCGCCGGCT CCTGGGGCTG GACGGCGAAT CCGTGGATCG GCAATTACGG CGACAATTCG CTGCTGTACT TCCACCAATA TCAGAACGCG CAGCCGGGCA GCCCGCTGTA TGAGAAGGCG CTGCGTGGCA GCAACATCGC CAAGGGCGGC ACGTTCGAGA ATCTGTTCGA CGGGCTGCGC AACGATGTGC GCAACGGCAC GCTGCCGCAG GTGTCGTGGA TCGCAGCCCC CGAGGCGTTC AGCGAGCATC CGAACTGGCT GCCGGGGCCG GGCGCCTGGT ACATTTCCAA GGTGCTGGAC ATCCTGACCT CGAATCCGGA GCTGTGGAGC AAGACCGTGC TGCTCATCAA CTACGATGAG GGCGGCGGCT TCTTCGATCA CGTCGTCGGT CCGTATCCGG CGATGTCGCA GGCCTGGGGA CAGTCGACCG TCGACGTCAG CACCGATCTG TTCGCCGGTG ACGGCAGTCA TGTCGCGGGT CCCTACGGCC TGGGCGTGCG TGTGCCGATG ATGGTGGTGT CGCCGTGGTC GCGCGGTGGC TATGTGTGCT CGCAGGTGTT CGACCACACC TCGGTGATCC GCTTCATCGA GCGCCGCTTC CATCACAAGG CGCGCGATCT GTTCGAGACC AACATCCCGG CGTGGCGCCG CGCCGTCTGC GGCGATCTCA CCTCGGCATT CAACTTCACC TCGCCGAACG AGGGCCTCGC GCCGCTGCCG AGCACGGCCG GCTACAAGCC GCCGGTGGCC GACATCACCT CGGGCACCCG CTTCGACGAC TATCACCCGG TGCCGCCGGC CAAGCAGGCG CTGCCGCAGC AGGAGCCGGG CATTCGCCCG GCGCGCCCAC TGCCTTACGA TCTCCGTGTC GACGGCGATG CCGACGCGGC GCAGAAGAAG TTCGGAATCC GCTTCGTCAA TCCGGGGCAG GCGGGCGTCT GCTTCCAGGT CCGCTCCGGC AACACCGCGA CCGGTCCGTG GAGCTACACG GTCGAGGCCG GCAAGTCGCT GTATGGCGTC TGGGACCTCG CGGCGAGCGC CGGACAGTAT GACCTGTCGG TGTACGGGCC GAACGGCTTC TTCCGCCACT TCAAGGGCGG TGTTGCCAGC ACGGCCGCGC TGGTTGATGT CGACACCGTT CATCTCTGCG ATTGGGAGTA TGGTGACGGC GCCCGCAGCC TGGCGATCGC GCTGACCAAC AAGGGCGCGA GCTGCGTGGT GACGCTGACC GACAATTACA CCGGACGCAG CGAACGGCAC CGCCTGCAGC GTGGCCAGCG GCTGGAGACG CAGATCGGTC TGCACCAGAC CCATGGCTGG TATGACCTTG CGGTGACCAC CGACAGCGAT GCCAACTTCA ACTGGCAGCT CGCGGGTCAC GTCGAGAATG GCCGCCCGAG CATCAGCGAT CCGGCGATGG GCCGGATCGC CGCGACCTGA
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Protein sequence | MSNTIAHNRR EFLRLLGASA ATAALSQSIE RAHAIPAFNR HGSIEDVKHI VVLMQENRAF DHYFGAMRGV RGFNDPRAVK LPNGNPVWQQ PNGTGSVMPF RVDNAGSVYV EDVAHGWNDG QKAWNNGNYD KWIANKGTTT MTCMNRQDLP WHYALADAFT ICDQYFCSVM GPTDPNRYYL WTGWDGNDGK NGGPVITNAE AGYDWTTFPE RLEKAGISWK VYQDIGTGLD AAGSWGWTAN PWIGNYGDNS LLYFHQYQNA QPGSPLYEKA LRGSNIAKGG TFENLFDGLR NDVRNGTLPQ VSWIAAPEAF SEHPNWLPGP GAWYISKVLD ILTSNPELWS KTVLLINYDE GGGFFDHVVG PYPAMSQAWG QSTVDVSTDL FAGDGSHVAG PYGLGVRVPM MVVSPWSRGG YVCSQVFDHT SVIRFIERRF HHKARDLFET NIPAWRRAVC GDLTSAFNFT SPNEGLAPLP STAGYKPPVA DITSGTRFDD YHPVPPAKQA LPQQEPGIRP ARPLPYDLRV DGDADAAQKK FGIRFVNPGQ AGVCFQVRSG NTATGPWSYT VEAGKSLYGV WDLAASAGQY DLSVYGPNGF FRHFKGGVAS TAALVDVDTV HLCDWEYGDG ARSLAIALTN KGASCVVTLT DNYTGRSERH RLQRGQRLET QIGLHQTHGW YDLAVTTDSD ANFNWQLAGH VENGRPSISD PAMGRIAAT
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