Gene BBta_6254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6254 
Symbol 
ID5150519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6495342 
End bp6496559 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content70% 
IMG OID640560963 
Producthypothetical protein 
Protein accessionYP_001242080 
Protein GI148257495 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAC AAATCCTGAC GGTTTGCGCG GTCGCGGCAG CGGGCGCGAC GGCAACGACG 
TTTGCTGGGG CGCAGCAGGT CTATCAGACT GCACCTGGTG CCTATTCGCC CGCGCCGACC
CCTTACCCGG CTGACAGCCG CGGCCGTGGT CCGGATTTCG ACGCGCTCGA CGACGAGGAC
ATGCCCGGCA ATTCGGCCGC GCTGCCACCG CCCGGCCCGG TTCTGTCGCC GGATGATCCG
CGCTATGGTC GTCCCGCCAA TGCGCCGGTC TATGGTGCGG CCCCGAACGG TCCGATCCTG
TCGCCCGACG ATCCGCGTTA TGGACGGCCG GCCAGCGCGC CGGTTTATAG CGCGGCTCCG
ACCGGCCCGG TGATGTCTCC GGATGATCCG CGTTACGGTC GCCCGGCCGG CCCGCCGCCG
GTAATCTATG GCGATCGTCC CGCGTCCGCT CAGCAGGCAT ATGGCACCTA TGGCAATGGC
GCCCCCGGTG GCGATGCCGG TGCGCCGCGC CCGCCAGGTG CCGTGAGCGG GGCGGTCACG
GGGACCGTGC AGGCTCCGGC GGGTGATCGG CCGTTGACCG TGGCGGCCCT GCCGCCCGAG
GAGCAGCCGG ATGCCGCGCC TGCGCCGCTG CCCGCTAATC TGCGCCGCCA GGAGGTCGAC
TTCGTCACCA AGGAGCCGCC GGGAACCATC GTCGTCGATA CCCCCAACAC CTACCTCTAT
CTGGTGCTCG GGAATGGCCG CGCGATGCGC TACGGCGTCC GTGTCGGCCG TGAAGGCTTC
ACCTGGACCG GCGTGCAGAA GATCACCAAG AAGACCGAGT GGCCAGACTG GTATCCGCCG
AGCGAGATGA TCGAGCGCCA GCCTTATCTG CCGCGCTTCA TGGCCGGTGG CCCGGGCAAT
CCGCTCGGCG CCCGCGCGAT GTATCTCGGT TCGACCGTGT ACCGCATCCA TGGCACCAAC
CAGCCGTCGA CGATCGGCAA GTTCGTGTCG TCGGGCTGCA TCGGCATGCT CAACGATGAC
GTCTCCGACC TGTTCGATCG CGTCAAGGTC GGCACCCGCG TGGTCGTCAT GCCCGGTGGA
CCGCCGCCGG GCTCGGCCAA GAACATGGCG GCCGCCGCCG CAGGTCCGGC GCAGGCTCCG
GTCCAGGCCC AGGCCGCCGT GCCGGGCAAC CAGCCGACCA CCGTTCAGCC GTTGCCGCCG
CCGGTGACGA TCCGCTGA
 
Protein sequence
MIRQILTVCA VAAAGATATT FAGAQQVYQT APGAYSPAPT PYPADSRGRG PDFDALDDED 
MPGNSAALPP PGPVLSPDDP RYGRPANAPV YGAAPNGPIL SPDDPRYGRP ASAPVYSAAP
TGPVMSPDDP RYGRPAGPPP VIYGDRPASA QQAYGTYGNG APGGDAGAPR PPGAVSGAVT
GTVQAPAGDR PLTVAALPPE EQPDAAPAPL PANLRRQEVD FVTKEPPGTI VVDTPNTYLY
LVLGNGRAMR YGVRVGREGF TWTGVQKITK KTEWPDWYPP SEMIERQPYL PRFMAGGPGN
PLGARAMYLG STVYRIHGTN QPSTIGKFVS SGCIGMLNDD VSDLFDRVKV GTRVVVMPGG
PPPGSAKNMA AAAAGPAQAP VQAQAAVPGN QPTTVQPLPP PVTIR