Gene BBta_6238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6238 
Symbol 
ID5149543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6481692 
End bp6482297 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID640560949 
Producthypothetical protein 
Protein accessionYP_001242066 
Protein GI148257481 
COG category[R] General function prediction only 
COG ID[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.778072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGACC TCACCCACCC GAACCTCGCC GCGATCTATC CGAGCCCGAA CGAGCGTGTG 
ATCGCGAAGG TCCGGCCGGC GCTGGACGTT CACAGTCGGA AGTTCATCGC CTTGTCGCCG
TTCTGCGTGA TCGCAAGCGC GGGGAAGGAT GGCAGCGTCG ACGCTTCGCC GCGCGGTGGT
CATCCGGGGT TCGTCCATAT CGATGGCGAC GATCGTCTGA TGATGCCGGA CCGCCCCGGC
AACAACAGAC TCGACAGTCT CAGGAACGTG TCGGAAGGAT CCGGCCTGGT GCAGCTGATC
TTCTTTGTAC CGGGACTCAA CGAAACCCTG CGGGTCAGCG GCACGGCCGC GCTATCCACC
GAGCCTGCCC TGCTCGCGCG GCTCGAGGAG TTCGGCAAGC CGCCGCGCTC CGTGCTCGTG
ATCGGCGTGC AGGAGGTCTA CTTCCATTGC GGCAAGGCGA TCATGCGCTC CAAGCTCTGG
TCGCAGGAGG CTCAGGTCGC CCGCTCCGCC ATGCCGAGCA TCAGTGAGAT CATTCATGAT
CAGACCCGGC TCGGCACGCC CGAGCCTCAG CACGTCACCG ACGCCCGCTG GCGCGAGCAG
CTTTGA
 
Protein sequence
MNDLTHPNLA AIYPSPNERV IAKVRPALDV HSRKFIALSP FCVIASAGKD GSVDASPRGG 
HPGFVHIDGD DRLMMPDRPG NNRLDSLRNV SEGSGLVQLI FFVPGLNETL RVSGTAALST
EPALLARLEE FGKPPRSVLV IGVQEVYFHC GKAIMRSKLW SQEAQVARSA MPSISEIIHD
QTRLGTPEPQ HVTDARWREQ L