Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6222 |
Symbol | thiO |
ID | 5150095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6469919 |
End bp | 6470935 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640560934 |
Product | thiamine biosynthesis oxidoreductase thiO |
Protein accession | YP_001242051 |
Protein GI | 148257466 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.787474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGA CAACCACGAC AGGCGGGGAT CGTCCCGTAT CCATCATCGG CGCGGGCATT GCCGGCGCCT GGCAGGCGCT GTTGTTCGCG CGCGCCGGCC ACGCCGTCAC GCTGCATGAA CGCAGCGACG CCGACCTGAT GCTCTCCACC AGTCACTGGG CCGGCGGCAT GCTGGCTCCC TATTGCGAGA GCGAGATTTC AGAACCTGTG ATCAGCCGGC TCGGCCTCGC CTCGCTCGCG CTGTGGCGGC GCGAGCTGCC GGAGACGCCG TTCAACGGCT CGCTGGTGAT CGCGCATGCG CGCGACCGCG CCGATTACGA CCGTTTCGCC CGCCGCACCT CCGGCTATGA ACGCCTCGAC GCGGCGCAGC TCGCAACGCT GGAGCCGTCG CTGGAGGGCC GCTTCCGCGA GGGGCTATTC TATCCGACCG AAGGCCATGT CGAACCGCGC CGCGTGCTGC CGAAGCTGCA CCAGCGCATC ATCGAGGCCG GCGGCCGCGT GCTGTTCAAC AGCAACGTCA CGGCGTCCGA TCTCGACGGT CTCGTGATCG ACTGCCGCGG CCTCGATGCA CGCGACGCCG AGCCGGAGCT GCGCGGCGTC AAGGGCGAGA TGATCCTGAT CGAAACCGCC GAGGTGCAGC TGGCGCGGCC GGTCCGGCTG ATGCATCCGC GCTGGCCGCT CTATCTGATC CCGCGCGCCG ACAACCTGTT CATGCTGGGC GCGACCTCGC TGGAGGCCGA GGACACCGGC GTGTCCCTGC GCTCGGCGCT GGAGCTGCTC GGCGCCGCCT ATTCGGTGCA TCCGGCGTTC GGCGAGGCGC GCATCCTCGA ATTCGGCTCG GGGCTGCGGC CGGCCTATCC GGACAATCTG CCGCGCATCA CCGTGACGAG CGAGCGTGAG ATCCGCGTCA ACGGCCTCTA TCGCCACGGC TTCCTGATCG CGCCGGCCCT GGCGCAGGCG ACCTTGAACT ACGTCGCGCA TGGCCAGATC GACAATGAGG TGATGCGATG CGCGTGA
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Protein sequence | MQQTTTTGGD RPVSIIGAGI AGAWQALLFA RAGHAVTLHE RSDADLMLST SHWAGGMLAP YCESEISEPV ISRLGLASLA LWRRELPETP FNGSLVIAHA RDRADYDRFA RRTSGYERLD AAQLATLEPS LEGRFREGLF YPTEGHVEPR RVLPKLHQRI IEAGGRVLFN SNVTASDLDG LVIDCRGLDA RDAEPELRGV KGEMILIETA EVQLARPVRL MHPRWPLYLI PRADNLFMLG ATSLEAEDTG VSLRSALELL GAAYSVHPAF GEARILEFGS GLRPAYPDNL PRITVTSERE IRVNGLYRHG FLIAPALAQA TLNYVAHGQI DNEVMRCA
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