| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6200 |
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| Symbol | |
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| ID | 5156319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6442281 |
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| End bp | 6443795 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640560911 |
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| Product | multidrug efflux system outer membrane subunit |
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| Protein accession | YP_001242029 |
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| Protein GI | 148257444 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.584656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGCC TCCTGCTCGC ATTAAGCCTC GCAGCCCCGC TGCTCGCCGG CTGCGCCGTC
GGCCCGGACT ACGTCACGCC GGATTTCGGC GTGCCGAACA GCTGGAGCAG CGACCGCGGC
CGCCCGGCGC CAGCGCTGAA GCTCGCGCAA TGGTGGCACA ACCTCGCTGA TCCGCAGCTC
GACCAGCTGA TCACCGAGGC TGTCGGCGGC AATCTCGACG TGGCCTCGGC CAAGGCGCGC
ATCCGCGAGG CTCGCGCCAC CCAGCGCCAG GCGATCGGCG CCCTGTTTCC GAGCATCAGC
GGCACCGGCT CCGCGACCGA GACGCGCAGC GCCAGTTCCT CGACGGGCGG TGTCGCGATC
GGCCCGACCA CCTACAGCCA ATATCAGGCC GGCTTCGATT CGAGCTGGGA GCTCGATCTG
TTCGGCGCCA ATCGCCGCGC GGTCGAAGCC GCATCCTATG GCGTCGACGC GGCGGATGAC
GATCTGCGCG CGACGCTGCT CACCCTGATC GGCGACGTCG CCTCCAACTA CATCGATGCC
CGCGCCTACC AGGCGCGGGT GGCGCTGGCC AAGCGCACCG CGGCCTCGCA GCGCGAGACC
GCCGCGCTGA CCGAGCGCAA GCAGAACGCC GGTTCGGCGT CCGCCGTCGA CACGGCCAAA
GCGAACGCGC TCGCTGCCAG CACCGAGGCG ACGATACCGA CCTATGAGAG CTCCTATCAG
CAGGCCGTGC ACCGGCTCGG CGTGCTGCTC GGCCGCGATC CAACCGCGCT CAGCCTGCGG
CTGTCGCGCG CCACGGTCAT CCCCTCGCCA CGTCTGCCGC TGCCCAAGGG CATCCCTGCC
GACGTGCTGG TGATGCGGCC CGACGTGCGC AAGGCCGAGC GTCAGCTTGC GCAATATACG
GCGAAGATCG GCCAGGCAAC CGCGGCGCTC TATCCGGATG TCAGCCTCAG CGGCACCGTC
TCGACGTCAG CGCTGAAGCT CGGCGACCTC GGCAAGAATT CGACGATCGG CTGGTCGATC
GGGCCGAGCC TCTCCGTCCC GATCTTCAAT GGCGGCAAGC TGCAGGCTGC GGTCGAGGTC
GCGGAGGCGC AGCGTGACCA ATATCATGTC GCCTGGCAGA GCGCCGTGCT GAGCGCGCTG
GAGGATGTCG AGAACGCCAT CGTCAACCTC GCCCAGGAGC GCATCCGTAT CCGCAGCCTG
ACGGAATCGG CGCGCCGTTA CAGCGAGGCC GCCAGACTGT CGCGCTCGCT GTACGAGACC
GGCTCCAGCA CCTTCCTCGA CGTGCTCGAT GCCGAGCGCT CGCAATTCAC CGCCGAAGAC
AGCCTGCTGG CAAGCCGGGC CACGCTGGCA AAGGACTACG TGGCGCTGGC CAAGGCGCTC
GGCGGCGGCT GGACCGGCGC GATCGACAGC ACCGTTCCCA TTGTTGTCGA CGACAACACC
GGTCCGCATC TGGCGCAGAC TGTCGTGGCC AGGTCACCGA AGCGTTTTTC CGAAGAGATC
AAACCCTCGC CATGA
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| Protein sequence | MTRLLLALSL AAPLLAGCAV GPDYVTPDFG VPNSWSSDRG RPAPALKLAQ WWHNLADPQL
DQLITEAVGG NLDVASAKAR IREARATQRQ AIGALFPSIS GTGSATETRS ASSSTGGVAI
GPTTYSQYQA GFDSSWELDL FGANRRAVEA ASYGVDAADD DLRATLLTLI GDVASNYIDA
RAYQARVALA KRTAASQRET AALTERKQNA GSASAVDTAK ANALAASTEA TIPTYESSYQ
QAVHRLGVLL GRDPTALSLR LSRATVIPSP RLPLPKGIPA DVLVMRPDVR KAERQLAQYT
AKIGQATAAL YPDVSLSGTV STSALKLGDL GKNSTIGWSI GPSLSVPIFN GGKLQAAVEV
AEAQRDQYHV AWQSAVLSAL EDVENAIVNL AQERIRIRSL TESARRYSEA ARLSRSLYET
GSSTFLDVLD AERSQFTAED SLLASRATLA KDYVALAKAL GGGWTGAIDS TVPIVVDDNT
GPHLAQTVVA RSPKRFSEEI KPSP
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