| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6146 |
|---|
| Symbol | |
|---|
| ID | 5155706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6374516 |
|---|
| End bp | 6375139 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560858 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241977 |
|---|
| Protein GI | 148257392 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0597032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCG ATGCCAGCCC CATTTCGTCG TTTGCCTTCA GCGGCTGGAC CACCACCTGG
CCCACCTCGC TTCTGGCCAT CATCTGGCTG ATCTGGCTCG CCAGCTGGGT CGGCGCCTCG
TTCTGGTCCG GGCAGACCCG CAAACATGTC ACGGTGATCA AGACCAGCCG CTATCATGCG
CTGATCGTGC TCGGCGGCAT CCTGTTCACG CCCTGGACGT CACGGATCCT CGGCGAGACG
CCGTTCTGGA ACCCTGGCGA GACCGGGGTC TATGTGCTGA CCGTGGTGAC GCTCGCCGGC
ATCGCCTTCA CCTGGTGGGC CCGCATCCAT CTCGGCCGGT TCTGGTCGAA CGCGATCACC
CACAAGGAAG GTCACAAGGT GATCGACACC GGCCCCTATG GCCTGGTCCG CCACCCGATC
TATACGGGCC TGATCCTCGG GATGATCGCG ACCGGCATCG CCGTGGGCAC TGTCAGCGCC
GTGCTCGGCG CCATCCTGAT CTCGCTCGGC ATGGCCTGGA AGGCCAAGAT GGAAGAGGTC
TTCCTCGCCC AGGAGCTCGG ACCGGATTAC GTCGCCTACC GCCAGCGCGT GCCGATGATC
ATCCCCTTCT TGCCGCCGGG TTGA
|
|---|
| Protein sequence | MPGDASPISS FAFSGWTTTW PTSLLAIIWL IWLASWVGAS FWSGQTRKHV TVIKTSRYHA
LIVLGGILFT PWTSRILGET PFWNPGETGV YVLTVVTLAG IAFTWWARIH LGRFWSNAIT
HKEGHKVIDT GPYGLVRHPI YTGLILGMIA TGIAVGTVSA VLGAILISLG MAWKAKMEEV
FLAQELGPDY VAYRQRVPMI IPFLPPG
|
|---|
| |