Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6117 |
Symbol | |
ID | 5156261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6343898 |
End bp | 6344773 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640560831 |
Product | branched chain amino acid ABC transporter permease |
Protein accession | YP_001241950 |
Protein GI | 148257365 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.139466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATC TGCTCGACCT GATCGTGGCG GGGCTCGCCA CCGGCGCCAT CTACGCGCTC GTCGCCGTCG GCTTCACCTT GCTGTGGCAG ACCTCCCAGA CCATCAACTT CGCCCAGGGC GAGTTCGTGA TGCTGCCGGC CTTCCTGATG CTCGCGGTGA TGCATCTCGG CGCGCCGTTC TGGCTCGCGG TGCTCGTCGG CATCGCCCTG TCGGCGCTGC TGCTCGGTCT CGCCTTCAAG ATGCTGCTGG TCGATCCGAT GCTGCGGCAT GGCGTGCTGC CGCTGGCGAT CGCCACCATG GCGCTCGCGA TCGGGATCAA GGAGGTGGTG AAGCAGTTCT TCAGCGCCGA GGCCTCACCA TTCCCCTCGA TCGTGCCGGT TGGCGATGTG TCCATCCTCG GCCGCGCGAT CTCGCTGCAG AGCCTCGGCG TGCTCGCTGT TGCGATCCTG GCCGTCGTCG GCCTGACCAC GTTGCTGAAT CGTACCTCGC TGGGTCACCA GATGCAGGCG GCGGCGCAGA ACCCGACGGT GGCGCGGATC ATCGGCGTGC CCGTCGAGCG CATGATCCTG TTGACCTTCC TGATCAACGC CGTGCTGGTG GCGCTGGCCT CGGTGCTGAT CACGCCGATC TATCTGGCGA AATTCTCCAG CGGCGAGGTG TTGGGGCAGG CGGCCTTCAT CGCCGCGATC GTCGGCGGCT TCAACCAGGT GCGTGGCGCC ATCGCCGGCG GTTTGCTGAT CGGCGTCGTC GACAATCTGG CCGCCGCCTA TGTCTCCACC CAGTATCGCG CCGCCGTGCC GATGCTGCTG CTGATCCTGA TGATCCTGTT CCGGCCGCAG GGCCTGCTCG GACGAGCCGA GGAGCGCACG GTATGA
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Protein sequence | MSNLLDLIVA GLATGAIYAL VAVGFTLLWQ TSQTINFAQG EFVMLPAFLM LAVMHLGAPF WLAVLVGIAL SALLLGLAFK MLLVDPMLRH GVLPLAIATM ALAIGIKEVV KQFFSAEASP FPSIVPVGDV SILGRAISLQ SLGVLAVAIL AVVGLTTLLN RTSLGHQMQA AAQNPTVARI IGVPVERMIL LTFLINAVLV ALASVLITPI YLAKFSSGEV LGQAAFIAAI VGGFNQVRGA IAGGLLIGVV DNLAAAYVST QYRAAVPMLL LILMILFRPQ GLLGRAEERT V
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