Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6106 |
Symbol | fumC |
ID | 5152090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6333303 |
End bp | 6334727 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640560820 |
Product | fumarate hydratase |
Protein accession | YP_001241939 |
Protein GI | 148257354 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAATT CAGCTAATTC ATTATCAGAT CGGCCGACGC GCACCGAGAC CGACAGCCTT GGCCCGATCG AGGTCGCAGC CGACCGCTAC TGGGGCGCTC AGACCGAACG CAGTCGGCAG AATTTTCGGA TCGGAAACGA CCGGATGCCG ATGGGCCTCG TGCGTGCCCT GGCGCTGGTG AAGCGCGCTG CGGCACAGAC GAACCGCGAG CTCGGACTTC TGGAGCCACG GACGGCGGAG GCGATCATCA GCGCAGCCCA GGAGGTCATC GACGGCAAGC TCGACGACCA TTTCCCGCTG GTCGTCTGGC AGACCGGCTC CGGCACTCAG ACCAATATGA ACCTCAATGA GGTGATCGCA AACCGCGCCA GTGAGCTGCT GGGCGGCCAG CTCGGGACCA AAAAGCCCGT GCACCCGAAC GATCACGTCA ACATGAGCCA GTCGTCGAAC GATGCGTTTC CGACTGCGAT GCATATTGCG GCGGCGCAGG CCATTGCCGG CCACCTGCTG CCGGCCCTCT CGGAGCTGCT GGCGGCTTTG CGCGCCCGGC AGGAGGCGTT CTCCGGCATC GTCAAGATCG GCCGGACCCA TACCCAGGAT GCGACGCCGC TGACGCTCGG ACAGGAGTTT TCCGGCTATG CGGCTCAAGT CGAGAGCGCC ATCGCCCGGA TCGAGACCGC CGCCCGCGAT CTGCTGCCGC TGGCCCAGGG CGGCACGGCG GTGGGCACCG GGCTGAACGC CGCTCCCGAG TTCGCCACGC TGTTCGCCCG ACACGTCGCG GACATCGTCG GACTGCCCTT CACCAGTGCC GTGAACAAGT TCGAAGCTTT GGCGTCGAAC GACGCCTATG TCTATGTGCA CGGCGCAATC AATGCCGCCG CCGCCGGCCT GTTCAAGATC GCCAACGATA TTCGCCTGCT GGGGTCCGGC CCGCGTTCGG GGCTGGGCGA ACTGATTCTG CCCGAGAACG AGCCCGGCTC CTCCATCATG CCAGGCAAGA TAAATCCGAC TCAGTGCGAA GCACTAACGA TGGTATGCTG CCAAGTGTTC GGTAATCACA CCGCTATTAC GATCGCCGGC AGCCAAGGTC ATTTCGAACT GAACGTCTAC AAACCATTAC TCACACATTG CACGATGCAA TCCATACAAT TACTAGGTGA TTCCGCTCGT TCATTCAGCG AACACTGCGT GGCTGGAATT CGCGCCGATG AGAAGCGGAT TCGCGAGCTA ATGGAACGTT CGTTGATGCT GGTGACCGCG CTGGCGCCGA AGATCGGCTA CGACAACGCC GCCAAGGTGG CGAAGACAGC GCATCAGAAC GGCACCACCT TGAAAGAAGA AGCGACGCGG CTCGGCTTCG TATCCGAAGA TGAATTTGAT GCTCTGGTCC AGCCTGAGAA GATGACCAGG CCCGGGAGAT CATGA
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Protein sequence | MTNSANSLSD RPTRTETDSL GPIEVAADRY WGAQTERSRQ NFRIGNDRMP MGLVRALALV KRAAAQTNRE LGLLEPRTAE AIISAAQEVI DGKLDDHFPL VVWQTGSGTQ TNMNLNEVIA NRASELLGGQ LGTKKPVHPN DHVNMSQSSN DAFPTAMHIA AAQAIAGHLL PALSELLAAL RARQEAFSGI VKIGRTHTQD ATPLTLGQEF SGYAAQVESA IARIETAARD LLPLAQGGTA VGTGLNAAPE FATLFARHVA DIVGLPFTSA VNKFEALASN DAYVYVHGAI NAAAAGLFKI ANDIRLLGSG PRSGLGELIL PENEPGSSIM PGKINPTQCE ALTMVCCQVF GNHTAITIAG SQGHFELNVY KPLLTHCTMQ SIQLLGDSAR SFSEHCVAGI RADEKRIREL MERSLMLVTA LAPKIGYDNA AKVAKTAHQN GTTLKEEATR LGFVSEDEFD ALVQPEKMTR PGRS
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