Gene BBta_6053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6053 
Symbol 
ID5155148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6275281 
End bp6276447 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content70% 
IMG OID640560765 
Producthypothetical protein 
Protein accessionYP_001241886 
Protein GI148257301 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGACAT CACACATCAA GACGGCTCTG CTGCAGATCC ACTCCATCCT GGGGCTGGCG 
GCGGCGCTCA TCCTCTCGGT GATGGGCGTC ACCGGCGCGA TCATGAGCTT CGAGGACGAG
ATCCAGGCGG GGCTCAACGG CGCCCTCGCC CATGTCGTCG CGCGCGATGC GGCGCCGCTG
GCGCCGGCCG AGCTCATTGC CCGGCTCCAG GCCGATCCGG CCCTCGGCAA GGTCGCTGCG
CTCTCGCTGT CGCGCGATCC GACATCAGCC GTCAGGGTCC GCTTCGCGCG CAGCGAGGAT
GGCGGCCATC CCGCCTCCGT GCTGGTCGAT CCCTATGACG GGCGCGTGCT CGGCACGCCG
CTCGGCGAGA GCTTCTTCGC CACGATCCGC CGGCTGCATC GCTGGCTGCT GCTGCCCGGC
GACGGCAAGG GCGCCGGCCG CCAGATCACC GGCGCGACGG TGCTCGGGCT GATCGTGCTG
TTGATCTCCG GCCTCGTGCT GCGCTGGCCG CGGCGGGCGA GCAGCGCGGC GTTGTGGCTG
AAGCCGCAAT GGCGGTTGAG CGGGCGCGGC CTGCACCGCT CGCTGCACAG CGTGATCGGC
ACCTGGCTGC TGCCGATCTA TCTGGTGATC GCGCTGTCGG GTCTGTCATA CTCCTACGTC
TGGTACAAAG ACGGACTCAC CTGGCTGTTG AGCCCGAAGC CGCCTGCTGC GCCGAAGCCG
GCGCGTGGCG AGCGCGATGC CAGTCCCGCC TCGCAGCAGC CCTTGGCGCT CGACCTGATC
TGGGCGACCG CGCTGCGCGA GGCTGGCGAC CGCTACATCA CGCTTGATCT CATGCTGCCT
GCGGGCGGCG CGACCGCTGT GCGGGTGCGA TCCTGGCTCG ACGAGACGCA CGACATCCGC
GACGAGTTCC GGATCGATGC CGGCACGGGC CGGCTGATCG CAGCGGAGCG CTATGCCGAC
AAGTCCACCG GTGAGCGGGT GCTGGCGCGC GTGTTCGATA TTCATCGCGG CAGCATGCTC
GGCTGGCCCG GCCGGATTCT GTTCATGCTG GCCGCCGCAA CGATGCCGCT ATTCGCGGTC
ACCGGCCTGC TGCTCTATCT GTCGCGGCGA CGGTTGCGGC GGCCGCCGCA GCCGGTGCAA
ACGGTCCAGC TGGTCCCCGG CGAATAA
 
Protein sequence
MTTSHIKTAL LQIHSILGLA AALILSVMGV TGAIMSFEDE IQAGLNGALA HVVARDAAPL 
APAELIARLQ ADPALGKVAA LSLSRDPTSA VRVRFARSED GGHPASVLVD PYDGRVLGTP
LGESFFATIR RLHRWLLLPG DGKGAGRQIT GATVLGLIVL LISGLVLRWP RRASSAALWL
KPQWRLSGRG LHRSLHSVIG TWLLPIYLVI ALSGLSYSYV WYKDGLTWLL SPKPPAAPKP
ARGERDASPA SQQPLALDLI WATALREAGD RYITLDLMLP AGGATAVRVR SWLDETHDIR
DEFRIDAGTG RLIAAERYAD KSTGERVLAR VFDIHRGSML GWPGRILFML AAATMPLFAV
TGLLLYLSRR RLRRPPQPVQ TVQLVPGE