Gene BBta_6007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6007 
SymbolnosR 
ID5150287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6225633 
End bp6227927 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content65% 
IMG OID640560728 
Productnitrous oxide reductase regulatory protein NosR 
Protein accessionYP_001241850 
Protein GI148257265 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0425173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCGA GTGATGTCGC CACCAATCGA GGACCTATGG CTGCAATGAT CCTGGCGGTC 
CTGATCGCGC TCTGCACGCT GGCAGCGCCG TGGCCAGCGC ATGCGGTCGG AGATCTCGCC
AACTATCTCT CAAAGATCAC GCCAAGCGAG TTCTTTCCCG GCGCGGATCG TTTCGGCGCA
CCGCAAGGCG AGCCGCCGAT CGTGCCCGTC TATCGCGGCG ATCAGCTCCA AGGCCATGTC
TACCTCAATT CCGATTTCGC CAATGCCGTC GGCTATTCCG GCAAGCCGAT CAATATTCTC
GTCGGCATCG CGCCCAAGGG CGTTATCACC GGGCTGAAGC TGGTCGACCA CAAGGAGCCG
ATCGTGCTGA TCGGCATTCC CGAGCCGCGC ATCATTGCCG CGCTCAACGG CCTGCTCGGC
AAGGACATGA CGCCGATCGC GCAAGGCGCG GAGCATGCGC CGCAAGCCGA CATCATCTCC
GGCGCCACTG TGACCGTGCT GGTGATGCAC GACAGCATCG TCCGCGCCGC CATGCGCCTG
ATCCGCAGCG GCCGGATCGG CGGGAGCAAC CCGGCAGGCG CGGTCACTAC ACCGCCGAGC
GTGGTCAAGA CGGTCGATCC CGACAAGAGC GAGATCCGCG ACTGGACGAG CCTGCTTGGC
GACGGCTCGG TGCGGCGGCT GCATCTCAGC ATCGGCGACG TCAACGACGC GTTCGCAAAA
TCGGGCAATA CGGTAGCCGC GCAAAATCCG GAGCCCGGCA ATTCGGACGA CACGTTCATC
GACCTCTATG TCGCGCTGGC CAGCGTGCCG TCGATCGGCC GCAGCCTGCT CGGCGAGGAG
GGCTATCAGC GGCTGAAAGA CCGGCTGCAG CCGGGCCAGC AGGCCATCCT CGTCGCAGGA
GACGGCGTCT ACTCGTTCAA GGGCTCGGCC TATGTCCGCG GCGGCATCTT CGATCGCATC
GAAGTGCTGC AGGACGGCGC CAGCACGCGA TTCCGCGACA AGAATCATAT GCGGCTGGGC
GCGCTGGAAG CCAACGGTGC GCCGGCATTG CGCGAGATCG GACTGTTCGT CACGCCGTCC
GAATTCACGC TCGACCCGGC CGAGCCATGG CAGCTTCAAC TCCTGGTCCA GCGGACCACC
GGCAGCCGTG ACAAGGCGTT CCTCTCGTTC GACGTCAATT ACACGCTGCC CGACGCCTAT
CTGAAGCGAC AGGCGCCGCT TGCTCCGCCG GCCGCGAATG CGCCTGCGCC GCTGCCTGCC
ACGAGTAGGG CGCAACAGTC GGCCGAGGAC GCTGAAGAGC CGCTGTGGAT GCGCATCTGG
CGCTCGCAAA CCGTGTCGGT CGGCATCACT GCACTGGCAC TGGCCGTGCT CACCGGCATC
TTCTTCTTCC AGAACGTGCT GGTGCGCCGG CCCCTGCTCT TCACCTGGGT ACGGCGGAGC
TACCTGCTGT TCGTGCTGGT CTGGCTCGGC TGGTACGCCA ATGCCCAGCT TTCAGTGGTC
AACATCCTCA CCTTCACCAA TGCGCTGCTG AGCGGCTTCC ATTGGGAGTT CTTTCTCGCC
GCTCCCCTGA TCTTCATCCT GTGGGCCGCG ACCGCCGCGG GCCTGCTGTT CTGGGGCCGC
GGACCGTTCT GCGGCTGGCT ATGTCCGTTT GGCGCGCTCC AGGAGCTGAC AAACACGGCG
GCGAAATGGC TCAAGGTGCC GCAGATCACG GTGCCCTGGG GCCTGCATGA GCGCCTCTGG
CCGATCAAAT ACATCATCTT CCTCGGCCTG TTCGGTTTGT CCTTGTACTC GGTCGCGCTC
GCCGAGCAGT TCGCCGAGGT CGAGCCGTTC AAGACCGCGA TCATCCTGAA ATTCGCGCGC
AGCTGGCCGT TCGTGCTGTA TGCGGCGGCG CTGCTCGGCA TCGGCTTGTT CATCGAACGG
TTCTTCTGCC GCTACCTGTG CCCACTCGGC GCCGCACTCG CCATTCCCGG ACGTATCCGC
ACCTTCGAAT GGCTGCGCCG CTGGAAGGAA TGCGGCTCGC CCTGCCAGCG CTGCGCCAAG
GAATGCCCGG TGCAGTCGAT CCATCCCGAG GGGCACATCA ACGTCAATGA GTGCATCTAC
TGCATGCATT GCCAGGAGCT CTATTACGAC GACCAGCGCT GCCCGCACAT GATCCAGGTC
CGGCTCAAGC GGGAGAAATT CGAGGCGATG TCATCGCCGT CGATGCGCAA GTCCGGCCAG
AAGACGCTGG TCACGCATGC CGGCCGGCCG CTGACGGCCC CGGTCCAGCC CCCCGATCTC
ACCCGTCCAT CATAA
 
Protein sequence
MVASDVATNR GPMAAMILAV LIALCTLAAP WPAHAVGDLA NYLSKITPSE FFPGADRFGA 
PQGEPPIVPV YRGDQLQGHV YLNSDFANAV GYSGKPINIL VGIAPKGVIT GLKLVDHKEP
IVLIGIPEPR IIAALNGLLG KDMTPIAQGA EHAPQADIIS GATVTVLVMH DSIVRAAMRL
IRSGRIGGSN PAGAVTTPPS VVKTVDPDKS EIRDWTSLLG DGSVRRLHLS IGDVNDAFAK
SGNTVAAQNP EPGNSDDTFI DLYVALASVP SIGRSLLGEE GYQRLKDRLQ PGQQAILVAG
DGVYSFKGSA YVRGGIFDRI EVLQDGASTR FRDKNHMRLG ALEANGAPAL REIGLFVTPS
EFTLDPAEPW QLQLLVQRTT GSRDKAFLSF DVNYTLPDAY LKRQAPLAPP AANAPAPLPA
TSRAQQSAED AEEPLWMRIW RSQTVSVGIT ALALAVLTGI FFFQNVLVRR PLLFTWVRRS
YLLFVLVWLG WYANAQLSVV NILTFTNALL SGFHWEFFLA APLIFILWAA TAAGLLFWGR
GPFCGWLCPF GALQELTNTA AKWLKVPQIT VPWGLHERLW PIKYIIFLGL FGLSLYSVAL
AEQFAEVEPF KTAIILKFAR SWPFVLYAAA LLGIGLFIER FFCRYLCPLG AALAIPGRIR
TFEWLRRWKE CGSPCQRCAK ECPVQSIHPE GHINVNECIY CMHCQELYYD DQRCPHMIQV
RLKREKFEAM SSPSMRKSGQ KTLVTHAGRP LTAPVQPPDL TRPS