| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5968 |
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| Symbol | mxaF' |
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| ID | 5150682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6178036 |
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| End bp | 6179841 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640560691 |
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| Product | methanol dehydrogenase large subunit |
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| Protein accession | YP_001241813 |
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| Protein GI | 148257228 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.366255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGG TACTACTCGC AACTTGTCTG ACGTCAGTCG CGGCGCTTGC CGCGGGTGGC
GCATGGGCCA GCGAAGAGCT GGTCAAGATG TCGGCCAACC CGAAGGACTG GGTGATGCCG
GCAGGAGATT ACGCCAATAC GCGTTACTCC AAGCTCAACC AGATCACCGC CCAGAACGTC
GGCAAGCTGC AGGTCGCGTG GACCTTCTCC ACCGGCGTGC TGCGCGGCCA CGAAGGCGGC
CCGCTCATCG TGGGCAACAT GATGTATGTG CATACGCCGT TCCCGAACAA GGTGTATGCC
ATCGATCTGG CGCAGGACAA CAAGATCGTC TGGCGGTACG AGCCGAAACA GGATCCGAAC
GTCATTCCGG TGATGTGCTG CGATACGGTC AATCGCGGCG TCGCCTATGG CGACGGCAAG
ATCTTCCTGC ACCAGGCCGA CGACAAGCTG GTGGCGATCG ACGCCAAGAC CGGCCAGCAC
GTCTGGACCG CCGTCAACGG CGATCCGAGC AAGGGCCAGA CCGGCACCTC CGCGCCGCTC
GTCGTCAAGG ACAAGGTCCT GGTCGGCACC TCCGGCGGTG AGTTCGGCGT CCAGTGCAGC
ATGACCGCTT ACGACATCAA GAGCGGCAAG CAGGTCTGGA AGGCCTACTC CGAAGGTCCG
GATGACCAGA TCCTGTTCGA TGCCAACACC ACCTCGCTCG GCAAGCCGGT GGGCAAGGAC
TCGAGCCTGA AGACCTGGCA GGGCGATCAG TGGAAGACCG GCGGCGGCTG CACCTGGGGC
TGGATCTCCT ATGATCCGCA GCTCGACATG GTGTATTACG GCTCGGGCAA CCCCTCGACC
TGGAATCCGA AGCAGCGTCC AGGCGACAAC AAATGGTCGA TGACGATCTT CGCGCGTGCG
GCCGATACCG GCGTGGCGAA GTGGGTCTAT CAGATGACGC CCCACGACGA GTGGGACTAT
GACGGCGTCA ACGAGATGAT CCTGTCGGAC CAGGCGATCA ACGGCCAGCC GCGCAAGCTC
CTGACCCACT TCGATCGTAA CGGTCTCGCC TACACCCTCG ATCGCACCAA TGGCGAGTTG
CTGGTCGCCG AGAAGTACGA CCCGAAGGTG AACTGGACCA CCGGCGTCGA CATGGACAAG
AACTCTGCGA CCTACGGACG TCCGAAGGTG GTCGATCAAT ACTCGACCGA CAAGCAGGGC
GAAGACGTCA ACACCAAGGG CATCTGCCCC GCCGCGCTCG GCACCAAGGA CGAACAGCCC
GCCGCCTATT CTCCGGACAC GCAGCTGTTC TATGTGCCGA CCAACCATGT CTGCATGGAC
TACGAACCCT TCAAGGTGAG CTACACTGCA GGTCAGCCCT ATGTCGGTGC GACGCTGTCG
ATGTATCCGC CTCCGGGTGA GAGCCATATG GGCAACTTCA TCGCCTGGGA CGGCAAGACC
GGCAAGATCG CCTGGTCGAA CAAGGAGCCG TTCTCGGTCT GGTCGGGTGC GCTCGCAACC
GCTGGCGGCG TGGTGTTCTA CGGAACGCTG GAAGGCTACC TCAAGGCTGT CGATGCCAAG
ACGGGCAAGG AGCTCTACAA GTTCAAGACT CCGTCCGGCA TCATCGGCAA CGTCACGACC
TATGAGAACG GTGGCAAGCA GTATGTCGCC GTGCTCTCGG GTGTCGGTGG CTGGGCCGGC
ATCGGTCTTG CGGCGGGCCT GACGGATCCG ACCGCCGGTC TCGGTGCGGT CGGTGGCTAC
GCAGCGCTGA GCAACTACAC CGCTCTCGGC GGCACGCTCA CCGTGTTCTC GCTCCCGCAA
CAGTGA
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| Protein sequence | MRKVLLATCL TSVAALAAGG AWASEELVKM SANPKDWVMP AGDYANTRYS KLNQITAQNV
GKLQVAWTFS TGVLRGHEGG PLIVGNMMYV HTPFPNKVYA IDLAQDNKIV WRYEPKQDPN
VIPVMCCDTV NRGVAYGDGK IFLHQADDKL VAIDAKTGQH VWTAVNGDPS KGQTGTSAPL
VVKDKVLVGT SGGEFGVQCS MTAYDIKSGK QVWKAYSEGP DDQILFDANT TSLGKPVGKD
SSLKTWQGDQ WKTGGGCTWG WISYDPQLDM VYYGSGNPST WNPKQRPGDN KWSMTIFARA
ADTGVAKWVY QMTPHDEWDY DGVNEMILSD QAINGQPRKL LTHFDRNGLA YTLDRTNGEL
LVAEKYDPKV NWTTGVDMDK NSATYGRPKV VDQYSTDKQG EDVNTKGICP AALGTKDEQP
AAYSPDTQLF YVPTNHVCMD YEPFKVSYTA GQPYVGATLS MYPPPGESHM GNFIAWDGKT
GKIAWSNKEP FSVWSGALAT AGGVVFYGTL EGYLKAVDAK TGKELYKFKT PSGIIGNVTT
YENGGKQYVA VLSGVGGWAG IGLAAGLTDP TAGLGAVGGY AALSNYTALG GTLTVFSLPQ
Q
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