Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5860 |
Symbol | |
ID | 5150902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6097181 |
End bp | 6098368 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640560587 |
Product | putative metal-dependent hydrolase involved in phosphonate metabolism |
Protein accession | YP_001241709 |
Protein GI | 148257124 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.323528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA TCTCGATTTC CAACGGCCTT TGCCTGATCG GCTCCGACCT CGTCGAAGCA TCGCTGCTCG TCGCCAACGG CGAGATCGCT GCGATCGATC CCCGCCGCCC GCCATCGGGC ATGGCACTCG ACGCGCGCGG ACTGACCGTG CTGCCCGGCA TTGTCGACAT CCACGGCGAT GCCTTCGAGC GGCAGATGAT GCCGCGCTCC GGCGTCGATT TTCCGATCGA CGTGGCCCTG ATCGACAGCG ACCGGCAGGC GGTCAGCAAC GGCATCACGA CAGTGTTTCA TGCCACGACC TGGTCGTGGG AGCCGGGCCT GCGCAGCGCC GGAAATGCGC GTCGCCTGCT CGAGGCGATC GAAAGCCTGC GGTCGCGGCT TGCCGCGGAC ACCCGCTTCC ATCTGCGCCA CGAGACCTAC AATCTCGACG ATGAGGACGA GATCCGCCAA TTGCTCGCGG CGCGGCGCAT CGACCTGTTC GCCTTCAACG ACCACATGGA CTCGACGGTC GCGAGCCTCG AAAAGCCGCA CAAACGCCAG CGTATGGTCG ACCGCACCGG CCTGTCCGGC GATGACTTCG ACCGCCTCGT CACGCGCATC GCATCGCGCG GTGACGCCGT TCCGACGTCC ATTGCCAGGT TGGCGGAAGC CGCGCGCGCG GCCGGCGTGC GGATGTTGTC GCATGACGAC GATAGCCCGG AGATGCGCAA GGCGTTTCGC TGCCAGGGCG TGACGATCGC CGAATTTCCG GTCAATGAAG CGACGGCGCG CGAGGCCGCC GGCGGCGGCG ATGCGATCGT CTTCGGCGCG CCCAATGTGG TCCGCGGCGG CAGCCATACC GGCTGGACCA AGGCGAGCGA CATGATCGCC AAGGGCCTGT GCTCGGTGCT GGCGTCGGAC TATTATTATC CGGCCCCCCT GCTCGCCGCG TATCGCCTCG CGGCCGACGG CATCTGTCCG TTGCCACGCG CCTGGGAGCT GATCTCGGCC GGCCCGGCCC GAGCGGCAGG CCTGTCCGAT CGCGGATCCC TCGCGGAAGG CTTGCGCGCG GATATCATCC TCATTGACGA CAGCGACGCC TTGCGTCCGC GTGTCGTGGC CGTGGTGGCA TCGGGACGCC TGGTCTACCT GACCGAGGCC GCTCGCCTCC ACGCCGTCGC CGTGCCGCGC GCGGTCGCGG CGGAGTGA
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Protein sequence | MTDISISNGL CLIGSDLVEA SLLVANGEIA AIDPRRPPSG MALDARGLTV LPGIVDIHGD AFERQMMPRS GVDFPIDVAL IDSDRQAVSN GITTVFHATT WSWEPGLRSA GNARRLLEAI ESLRSRLAAD TRFHLRHETY NLDDEDEIRQ LLAARRIDLF AFNDHMDSTV ASLEKPHKRQ RMVDRTGLSG DDFDRLVTRI ASRGDAVPTS IARLAEAARA AGVRMLSHDD DSPEMRKAFR CQGVTIAEFP VNEATAREAA GGGDAIVFGA PNVVRGGSHT GWTKASDMIA KGLCSVLASD YYYPAPLLAA YRLAADGICP LPRAWELISA GPARAAGLSD RGSLAEGLRA DIILIDDSDA LRPRVVAVVA SGRLVYLTEA ARLHAVAVPR AVAAE
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