| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5716 |
|---|
| Symbol | |
|---|
| ID | 5155441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5965491 |
|---|
| End bp | 5966384 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640560453 |
|---|
| Product | putative high-affinity branched-chain amino acid transport system permease protein |
|---|
| Protein accession | YP_001241575 |
|---|
| Protein GI | 148256990 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.010418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.660211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT CCTTCCTTAT CCAGCTCCTC GTCAACGGCC TCGTGGTCGG CACGCTCTAT
GGCGTGGTCG CGATGTCGTT CGTGCTGATC TACAAGGCGA CGCAGGTCGT CAATTTTGCC
CAAGGCGAGC TGCTTTTGAT CGGCGCCTGG GTGTGCTGGC TGCTGCTGAC GAAATATCAA
GTCCCGTTCT GGGTCGGCAT GCCGCTGACG CTCGTCTTCA TGTTCGCGTT CGGCATCGCC
GTGCAGGTCG TGATCCTCCG TCCCATGATC GGCGAGCCCA TCATTTCCGT CATCATGGTG
ACGATCGGCC TGTCGACGGT GTTCCAGGCG GCGCTGAAAT GGATGTTCGG CGTCAATCCG
CAGCCGTTCC CGCCGGTGTT CGCGAGCAAG GCAGTCGATC TGTTCGGGCT ACAGATCCAG
ACCGTCTATG TCATGAGCCT CGCGGTCTCG GTCGCGATGA TGCTCGGCAT GGCCTGGTTC
TTCAAAGCCT CGAAATACGG CCTCGCGATG CGCGCCACCG CCTTCAACCA GCAGGTCGCG
CAATCGCTCG GCATCTCCGT CAAGAACGTG TTCGCGATGG CCTGGGCGAT CTCGGCAACC
GTCTCCGCCG TGGCCGGCGT CGTCGTCGCC GTCGTCAACG GCGTGTCGTC GGGACTGTCC
GCCTATGGCA TCAAGGTGTT TCCCGCGGCG ATCCTCGGCG GCCTCGACTC GGTCGGCGGC
GCCGTGCTCG GCGGCATCAT CATCGGCCTG CTCGAAAACA TCGCGCAATA TGTCGACAGC
CAATACCTGC ACTGGGGCAA TCTCTACGAG ATCGCGCCGT TCTACGTGCT GATCCTCATC
CTGATGATCA AGCCCTACGG CCTGTTCGGC ACCAAAGACA TCGAGCGGAT ATGA
|
|---|
| Protein sequence | MNTSFLIQLL VNGLVVGTLY GVVAMSFVLI YKATQVVNFA QGELLLIGAW VCWLLLTKYQ
VPFWVGMPLT LVFMFAFGIA VQVVILRPMI GEPIISVIMV TIGLSTVFQA ALKWMFGVNP
QPFPPVFASK AVDLFGLQIQ TVYVMSLAVS VAMMLGMAWF FKASKYGLAM RATAFNQQVA
QSLGISVKNV FAMAWAISAT VSAVAGVVVA VVNGVSSGLS AYGIKVFPAA ILGGLDSVGG
AVLGGIIIGL LENIAQYVDS QYLHWGNLYE IAPFYVLILI LMIKPYGLFG TKDIERI
|
|---|
| |