Gene BBta_5704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5704 
Symbol 
ID5150042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5952879 
End bp5953625 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID640560441 
Productbranched chain amino acid ABC transporter ATP-binding protein 
Protein accessionYP_001241563 
Protein GI148256978 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.695215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACG CCTTGGAAAC GCGCGGCCTC GACAAGCATT TCGGCGGCCT CCACGTCACC 
CGCGATCTGT CGCTCAAGAT TGCGCCCGGC GCGCGGCACG CGCTGATCGG CCCGAACGGC
GCGGGCAAGA CCACCGTGAT CAATCAGCTG ACCGGGGTGC TGGAGCCGAG TGCAGGGCGT
ATCCTGCTGG AAGGGCAGGA CATCACCGAT CTGCCGGTGC ACAAGCGGGT GCTGCGCGGC
CTGTCGCGCA CCTTCCAGAT CAACCAGCTC TACCCTGACC TGACTCCGTT GGAGACGATC
GGGCTGGCTG TCTCCGAGCG GCTTGGCGGC GGCGGCAATT GGTGGCGGCG CATGGGGACG
CGCGACGACA TCAATGCCGA GATCGCTGAG ACCCTGGAGC GCTTCCGGCT GCTCGACGTG
ATGAATGACC GCACCTCGAC CTTGCCCTAT GGCAAGCAGC GCCTGCTGGA GATCGCAGTC
GCGATCGCGG CCAAGCCACG CGTGCTGCTG CTCGATGAGC CCGCCGCAGG CGTGCCCGAG
GGCGAGCGCA AGGACATTCT CGCTGCCGTC GCCGCGCTGC CGCGTGACGT GACGGTGCTC
TTGATCGAGC ACGACATGGA CCTCGTCTTC TCCTTCGCCG ACCGCATCTC GGTTCTCGTC
TCCGGTGCGC TGCTGGTCGA GGGCGCGCCC GATGAGGTCG CGCGCGACCC GCAGGTCAAG
GCCGTCTATC TCGGCGAGGC CGCGTGA
 
Protein sequence
MTYALETRGL DKHFGGLHVT RDLSLKIAPG ARHALIGPNG AGKTTVINQL TGVLEPSAGR 
ILLEGQDITD LPVHKRVLRG LSRTFQINQL YPDLTPLETI GLAVSERLGG GGNWWRRMGT
RDDINAEIAE TLERFRLLDV MNDRTSTLPY GKQRLLEIAV AIAAKPRVLL LDEPAAGVPE
GERKDILAAV AALPRDVTVL LIEHDMDLVF SFADRISVLV SGALLVEGAP DEVARDPQVK
AVYLGEAA