Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5704 |
Symbol | |
ID | 5150042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5952879 |
End bp | 5953625 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560441 |
Product | branched chain amino acid ABC transporter ATP-binding protein |
Protein accession | YP_001241563 |
Protein GI | 148256978 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.695215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTACG CCTTGGAAAC GCGCGGCCTC GACAAGCATT TCGGCGGCCT CCACGTCACC CGCGATCTGT CGCTCAAGAT TGCGCCCGGC GCGCGGCACG CGCTGATCGG CCCGAACGGC GCGGGCAAGA CCACCGTGAT CAATCAGCTG ACCGGGGTGC TGGAGCCGAG TGCAGGGCGT ATCCTGCTGG AAGGGCAGGA CATCACCGAT CTGCCGGTGC ACAAGCGGGT GCTGCGCGGC CTGTCGCGCA CCTTCCAGAT CAACCAGCTC TACCCTGACC TGACTCCGTT GGAGACGATC GGGCTGGCTG TCTCCGAGCG GCTTGGCGGC GGCGGCAATT GGTGGCGGCG CATGGGGACG CGCGACGACA TCAATGCCGA GATCGCTGAG ACCCTGGAGC GCTTCCGGCT GCTCGACGTG ATGAATGACC GCACCTCGAC CTTGCCCTAT GGCAAGCAGC GCCTGCTGGA GATCGCAGTC GCGATCGCGG CCAAGCCACG CGTGCTGCTG CTCGATGAGC CCGCCGCAGG CGTGCCCGAG GGCGAGCGCA AGGACATTCT CGCTGCCGTC GCCGCGCTGC CGCGTGACGT GACGGTGCTC TTGATCGAGC ACGACATGGA CCTCGTCTTC TCCTTCGCCG ACCGCATCTC GGTTCTCGTC TCCGGTGCGC TGCTGGTCGA GGGCGCGCCC GATGAGGTCG CGCGCGACCC GCAGGTCAAG GCCGTCTATC TCGGCGAGGC CGCGTGA
|
Protein sequence | MTYALETRGL DKHFGGLHVT RDLSLKIAPG ARHALIGPNG AGKTTVINQL TGVLEPSAGR ILLEGQDITD LPVHKRVLRG LSRTFQINQL YPDLTPLETI GLAVSERLGG GGNWWRRMGT RDDINAEIAE TLERFRLLDV MNDRTSTLPY GKQRLLEIAV AIAAKPRVLL LDEPAAGVPE GERKDILAAV AALPRDVTVL LIEHDMDLVF SFADRISVLV SGALLVEGAP DEVARDPQVK AVYLGEAA
|
| |