| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5703 |
|---|
| Symbol | |
|---|
| ID | 5150094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5952163 |
|---|
| End bp | 5952879 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640560440 |
|---|
| Product | putative branched-chain amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001241562 |
|---|
| Protein GI | 148256977 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.507716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TGCTCGCCAT CGAGAACCTG CGTGCCGGCT ACGGCCAGGC GGTCGTGCTG
CCGAACATGT CGCTGAGGCT CCCGGAAGGC CAGGTGCTGG CGCTGCTCGG CCGCAACGGC
ACCGGCAAGA CCACGCTGAT CAACTCCATC GTCGGCGTGA CCCGGCGCTT TTCCGGCAAG
ATCGCGCTTG CCGGCACCGA CATCTCCGGT CTGCGCGCCG ACCAGCGCGC CCGCGCCGGC
ATCGGCTGGG TGCCGCAGGA GCGCAACATC TTCCGCTCGC TCACCGTGGA GGAGAACATG
ACCGCGGTGG CGCAGCCGGG ACCATGGACG GTGGAGCGCG TCTACGCGAT GTTCCCAAGG
CTCAAAGAGC GCCGCAACAA TTTCGGCAAC CAGCTCTCGG GCGGCGAGCA GCAGATGTTG
GCGATCGGCC GCGCGCTCAC CCTGAACCCG AAGGTGCTGC TGTTGGACGA GCCGACCGAG
GGGTTGGCGC CGATCATTGT CGAGGAACTG CTGACGGCGA TCGGCACCAT CAGCCGCGCC
GGCGGGCTGT GCTCGATCAT CGTCGAGCAG CATGCGCAGA AGCTGCTCAC GCTGGCCGAT
CGCGTCGTGA TCCTGGAGCG CGGCACCATC GTTCACGACG CGCCCTCCAG TGCGCTGAAG
GCAGATCCCG CGCCGCTGGA GCGGCATCTG GGGGTTGCGA GCGCGGCGGC GCACTGA
|
|---|
| Protein sequence | MTDLLAIENL RAGYGQAVVL PNMSLRLPEG QVLALLGRNG TGKTTLINSI VGVTRRFSGK
IALAGTDISG LRADQRARAG IGWVPQERNI FRSLTVEENM TAVAQPGPWT VERVYAMFPR
LKERRNNFGN QLSGGEQQML AIGRALTLNP KVLLLDEPTE GLAPIIVEEL LTAIGTISRA
GGLCSIIVEQ HAQKLLTLAD RVVILERGTI VHDAPSSALK ADPAPLERHL GVASAAAH
|
|---|
| |