Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5668 |
Symbol | rfaE |
ID | 5150423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5913984 |
End bp | 5915456 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560406 |
Product | D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase |
Protein accession | YP_001241528 |
Protein GI | 148256943 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.270101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.381321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACT TTGACGATCT CTCGCAAGCG ATCGCCCGCC AGACGGTGCT GTGCGTCGGA GACCTCATGC TGGATGAGTT CGTCTATGGC GAGGTGTCGC GGATCTCTCC CGAAGCGCCA GCGCCGGTGA TTGCCGTTCA GCGCAGCGAG ATCAATATCG GCGGTGCCGG CAACGTCGCA CGCAACATCG CAGCGCTTGG CGCACGCTGC ATCTTCGTCG GCCTCGTCGG CGATGACGCG GCGGCGGCCC AACTCGAGGC GGAACTGGCC AGGGAGCCGG GCATCGAGAC CGTGCTGGTG CGCGATGCGT CGCGGCCGAC GACGCGCAAG GTTCGCTTTG TGTCCGAGCA TTTCTCCGCC CACATGCTGC GCGCCGATTG GGAGCGCGCC GCGCCGGCGT CCGGCGAGAT CGAGCAGAGG CTGATCGATG CGATCGTGCC ACGGCTGGCA AGGGCGGATA TCGTGTTGTT GTCCGACTAT GCCAAGGGCG TGCTGACGGC GCGCGTGCTG CGCAACGTGA TCGATGCCGC GCGCCGGGCC GGCAAGCGTG TGATCGTCGA TCCCAAGAGT GCGAATCTTG CGATCTACCG CGGAGCGAGT GTGTTGACGC CGAACCGCAA GGAGTTTTCC GAAGCAACCC GCAGCCGTGC CGAGACGGAG CAGGAGATCG CTGCGGCGGC GCAGGATGCG ATCTATCTCG CCGATTGCGA GGCCATTCTG GTGACGCAGA GCGAGCGCGG CATGACCTTG GTGCCGCGCC AGGGCGATGC AATCCACGTC CCGGCCTATC CGGTGAAGGT GCGCGACGTC TCAGGGGCTG GCGACACTGT GGTTGCCGTC CTCGCCGCGA CGCTTGCGGC CGGTGCGGGC TGGGAGGAGG CCTTGCGCAT GGCGAGCGCC GCAGCGGCCG TGGCGGTCAG CAAACAGGGA ACTGCCAGCG TGACATCGGC CGAACTGCGC CGGAAGATTC TTCCTCACGC CTATCGCGCG GCCGAGGAAA AGATCATCGC GGGCGACGGC GAAATCCTGG CTCGGGTCGA GGGCTGGCGG AGCGAGGGAC TGCGCGTCGG TTTCACCAAT GGGTGCTTCG ACATTCTGCA TCCAGGCCAT GTCAAGGTGC TCACGGCTGC CCGCGCCGCC TGCGACCGGC TGGTGGTCGG GCTGAACAGC GATGCGTCGG TCAAACGGTT GAAGGGCGAG AGCCGTCCCG TTCAGGACGA GCGTGCCCGC GCCGAGGTGC TGGCTGCGCT CGAGGCGGTG GATCTCGTCG CCATCTTCAC GGAGGATACG CCGCTTCGCC TGATCGAGCT GGTTCGCCCG AGCGTGTTGG TGAAGGGCGG TGATTACACG CGTGAGCAGG TGGTCGGACA CGAGGTCGTG GAGGCGGGCG GCGGTGAGGT GATCCTGATT GACATCCTGA AGGGGCACAG CACGACGGCG CTGGTCGATC GGGCACGGAG CGACGGCCGA TGA
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Protein sequence | MFDFDDLSQA IARQTVLCVG DLMLDEFVYG EVSRISPEAP APVIAVQRSE INIGGAGNVA RNIAALGARC IFVGLVGDDA AAAQLEAELA REPGIETVLV RDASRPTTRK VRFVSEHFSA HMLRADWERA APASGEIEQR LIDAIVPRLA RADIVLLSDY AKGVLTARVL RNVIDAARRA GKRVIVDPKS ANLAIYRGAS VLTPNRKEFS EATRSRAETE QEIAAAAQDA IYLADCEAIL VTQSERGMTL VPRQGDAIHV PAYPVKVRDV SGAGDTVVAV LAATLAAGAG WEEALRMASA AAAVAVSKQG TASVTSAELR RKILPHAYRA AEEKIIAGDG EILARVEGWR SEGLRVGFTN GCFDILHPGH VKVLTAARAA CDRLVVGLNS DASVKRLKGE SRPVQDERAR AEVLAALEAV DLVAIFTEDT PLRLIELVRP SVLVKGGDYT REQVVGHEVV EAGGGEVILI DILKGHSTTA LVDRARSDGR
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