Gene BBta_5636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5636 
Symbol 
ID5153744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5877024 
End bp5877872 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID640560378 
Producttransketolase subunit A 
Protein accessionYP_001241500 
Protein GI148256915 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3959] Transketolase, N-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTG CAGTCCGGAG CACCGCGGCC AAGCCCGACG TCGCCGCCCT GAAGGCGCAG 
GCCGCCAGGC TGCGCGGCAA GATCATCGAG ATGTCGCACA AGGCCCAGGC CGCGCATCTG
GCCTCGTCGC TGTCCTGCGC CGATGCGATG ACTGCTGCTT ATTGGCACGT GCTGAACATC
GACCCGAAAA ACCCCACCGA TCCGCTGCGC GACCGGTTCA TCCTGTCCAA GGGTCATGCC
GCCGCGGCGC TGTTCGCGAC CTTGGCGATG AAGGGCTACT TCCCGATCGA GGAGCTCGAT
ACCTATTGCC AGGACGGCGG CCGGCTCGCC GAACATCCGC CGGCGAACCT TCTGCCCGGC
GTCGAGGCCG CGACCGGCTC GCTCGGCCAC GGCCTGCCGC TGGGCTGCGG CATGGCGCTG
GCGGGCCGCA TCAAGGGCGA GAGCTTCCGC GTGTTCGCTC TGCTGTCGGA CGGCGAGAAC
AATGAGGGCT CGGTGTGGGA GGCCGCGATG TTCGCCGCCG CCCAGAAACT CGAGAATGTC
TGCGTCGTCG TCGACTACAA CAAGTGGCAG GCCACCGCGC GCTCCAACGA GACCCTGATG
CTGGCGCCGC TGCGCGACAA ATGGGCCGCC TTCGGCTGGG ACGCGCATGA GATCGACGGC
CATGACGTCG GCGCGCTCGC CGAGGCCATG CAGAACATTC CGAACGGGTC GGGCAAGCCG
GTGGCGCTGA TCGCCCACAC GGTCAAGGGC AAGGGCGTGT CGTTCATGGA GGACGACAAC
AACTGGCATT ACCGCGCCCC CACCGCTGAG GAAGTCGTCA AGTCGTTCAA GGAGCTCGGC
CTGTCATGA
 
Protein sequence
MNVAVRSTAA KPDVAALKAQ AARLRGKIIE MSHKAQAAHL ASSLSCADAM TAAYWHVLNI 
DPKNPTDPLR DRFILSKGHA AAALFATLAM KGYFPIEELD TYCQDGGRLA EHPPANLLPG
VEAATGSLGH GLPLGCGMAL AGRIKGESFR VFALLSDGEN NEGSVWEAAM FAAAQKLENV
CVVVDYNKWQ ATARSNETLM LAPLRDKWAA FGWDAHEIDG HDVGALAEAM QNIPNGSGKP
VALIAHTVKG KGVSFMEDDN NWHYRAPTAE EVVKSFKELG LS