Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5565 |
Symbol | ttuC |
ID | 5153695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5791186 |
End bp | 5792259 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560308 |
Product | tartrate dehydrogenase/decarboxylase |
Protein accession | YP_001241430 |
Protein GI | 148256845 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTC ATTCCATCGC CGCCATTCCC GCCGACGGCA TCGGCCCCGA AGTGATCTCG GCCGGCGTCC GAGTCCTGGA GGCGCTCGCC AAGCGCTCGG GCGACATCAG CTTCAACGTC AAGACCTTCG ATTGGGGCTC GGACTACTAC AAGAAGAACG GCGTGATGAT GCCGGCCGAC GGCCTCGCCG AGCTGAAGAA ATTCGACGCG ATCTATTTCG GCGCGGTCGG CGCGCCTGAC GTGCCCGATC ACATCACGCT GTGGGGCCTG CGGCTGCCGA TCTGCCAGGG CTTCGATCAA TATGCCAATG TGCGCCCGAC CAAGATCCTG CCCGGCGTTT CTTCGCCGCT GCGCAATGTC GGCGTCGGCG ATCTCGACTG GGTGATCGTG CGCGAGAACT CCGAAGGCGA ATATGCCGGC ATGGGCGGAC GTGCGCATCG CGGTCTGCCG GAGGAGGTGG GCACCGAGGT CGCCGTCTTC ACGCGCATCG GCGTCACCCG CATCATGCGC TTTGCCTTCA AGCTCGCGCA GTCGCGGCCG CGCAAGTTCC TCACCGTCGT CACCAAGTCG AACGCGCAGC GCCACGGCAT GGTGATGTGG GACGAGATCG CCGCCGAAGT GGCGCGCGAA TTCCCCGACG TGACCTGGGA CAAGATGCTG GTCGATGCGA TGACCGTGCG TATGACCCTG CAGCCGAAGA GCCTCGACAC CATCGTTGCG ACCAACCTGC ACGCCGACAT TTTGTCGGAT CTGGCCGGCG CGCTCGCCGG CAGCCTCGGC GTGGCGCCGA CCGGCAACAT CGATCCGGAG CGCCGCTTCC CGTCGATGTT CGAGCCGATC CATGGCTCGG CCTTCGACAT CACCGGCAAG GGCATCGCCA ATCCCGTTGC GACATTCTGG ACCGGCGCAC AGATGCTCGA ACATCTCGGC GAGAAGGAGG CCGCGACACG GCTGATGGCG GCGGTCGAGA AAGTGTGTGC GGCCGGCATT CTGACGCCCG ATGTGGGCGG CAAGGCGACC ACCAAGGAGG TGACCGACGC TGTCATCGAC GCGATTCACG GCTCCAACGT CTGA
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Protein sequence | MRTHSIAAIP ADGIGPEVIS AGVRVLEALA KRSGDISFNV KTFDWGSDYY KKNGVMMPAD GLAELKKFDA IYFGAVGAPD VPDHITLWGL RLPICQGFDQ YANVRPTKIL PGVSSPLRNV GVGDLDWVIV RENSEGEYAG MGGRAHRGLP EEVGTEVAVF TRIGVTRIMR FAFKLAQSRP RKFLTVVTKS NAQRHGMVMW DEIAAEVARE FPDVTWDKML VDAMTVRMTL QPKSLDTIVA TNLHADILSD LAGALAGSLG VAPTGNIDPE RRFPSMFEPI HGSAFDITGK GIANPVATFW TGAQMLEHLG EKEAATRLMA AVEKVCAAGI LTPDVGGKAT TKEVTDAVID AIHGSNV
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