Gene BBta_5563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5563 
Symbol 
ID5153693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5788608 
End bp5789420 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID640560306 
Productputative UDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001241428 
Protein GI148256843 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.419435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.620506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTG AGACTGCTGG TGAAGAAAGC CCGACCCGGC GCTTTCGTAC GCTCTTCATC 
TCCGATGTTC ATCTCGGAGC CCGCGGATCG CAGGCCAATC TGCTCGTCGA TTTCCTGCGC
CATCACGACG CCGACACCAT CTACCTGGTC GGCGACATCA TTGACGGCTG GGCGCTGAAA
TCGAGCTGGC ACTGGCCACA GTCACACAAC GATCTCGTCC AGAAGATGCT GCGCAAGGCG
CGCAAGGGGG CGAAGATCGT CTACGTGCCT GGCAATCACG ACGAGTTCCT GCGCGGCTAT
TACGGCACCC ATTTCGGTGG CATCGATGTC GTCGAGAACA TCGTGCACAC CGGCAAGGAT
GGGAAGCGCT ACCTCGTCAT TCACGGCGAC ATCTTCGATC TCGTGGTCCA GAACGCCCGC
TGGCTCGCCC ATCTCGGCGA CAAGGCCTAC GACTTCGCGA TCCAGATGAA CCGCCTGGTG
AACTTCTTCC GTCGCATGTT CGGCGTGCCC TATTGGTCGC TGTCGCAATG GGCCAAGCAG
AAGGTCAAGA ACGCCGTGAA CTATATCGGC GCGTTCGAGA CCGCGCTGGC GGCCGAGGCG
CGGCGGCACG GCGCCGATGG CGTGATCTGC GGTCATATCC ACTGTGCCGT GATCCGCGAC
CAGGACGGGA TCCGCTACAT GAATTGCGGC GACTGGGTCG AGAGTTGCAC GGCGCTTGTC
GAGCACGAGG ATGGCAGCTT CGAGATTCTG ACTTGGACCG ATCCGTTGAA GCAGGCAGCC
CCGGTTCCAC AACTGACGGC CCGCGCCGCC TGA
 
Protein sequence
MGLETAGEES PTRRFRTLFI SDVHLGARGS QANLLVDFLR HHDADTIYLV GDIIDGWALK 
SSWHWPQSHN DLVQKMLRKA RKGAKIVYVP GNHDEFLRGY YGTHFGGIDV VENIVHTGKD
GKRYLVIHGD IFDLVVQNAR WLAHLGDKAY DFAIQMNRLV NFFRRMFGVP YWSLSQWAKQ
KVKNAVNYIG AFETALAAEA RRHGADGVIC GHIHCAVIRD QDGIRYMNCG DWVESCTALV
EHEDGSFEIL TWTDPLKQAA PVPQLTARAA