| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5547 |
|---|
| Symbol | |
|---|
| ID | 5153380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5765239 |
|---|
| End bp | 5766333 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640560290 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241412 |
|---|
| Protein GI | 148256827 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0563067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.327902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCC TGCTGACCAC GCTCTCGCGT GGCTTCAAGA AATGGATCGG CTGGAAGCGG
CTGGGGATTG CAGCGAGCCT TGCGATCATC GCCTTCGCGG TCACGACGCT CATCCGCACG
CTGAAGGGCG TTGACGGCAG CGTGATCCTG ACCGCCCTGA CCGAAATCCC GCCCGGTCAC
ATCGCGCTCG CGGCATTGTG TGTGATCGGC GCATTCTGCA CGCTCACCTT CTACGACTAT
TTTGCACTGC GAACGATTGG CAAAAAACAT GTGCCCTATC GCATCGCGGC GATGAGCGCC
TTCACCAGCT ATTCGATCGG CCACAACATC GGAGCTACCG TGTTCACCGG CGGCGCGATC
CGGTTCCGCA TCTATTCGGA TTACGGGCTC TCGGCGATCG ACGTCGCCAA GATCTGCTTC
CTGTCGGGGC TGACCTTCTG GCTCGGCAAT CTGTTCGTGC TCGGCATCGG CATGACCTTG
CATCCGGCCG CCGCCTCGTC GATGGACCAG CTGCCCCCGG CCGTGAACCA GCTGATCGCG
ATCGGCATCC TGGGTGCGAT CTTCGCCTAT CTCGGCTGGC TCGCCGCCGG CAAGAACCGC
CGCCAGCTCG GCCAGAACGG CTGGAAGGTT GTGCTGCCCT CGGCGCAGCT GACACTGGTG
CAGATCCTGA TCGGCGTGGT CGATCTCGGC TTCTGCGCAC TGGCGATGTA CCTGCTCGTG
CCGTCCAATC CGCCGATCGA CTTCCTGTCG CTGTCGGTGG TGTTCATCCT TGCCACCCTG
CTCGGTTTCG CCAGCCATGC GCCGGGCAGC ATCGGCGTCT TCGATGCGGC GATGCTCGTG
GCGCTGCCGC AATTCGGCCG CGAGCAGCTG CTCGCCACCC TGCTCGTGTT CCGCGTGCTG
TATTTCGTCA TTCCGTTTGC GACGGCGATC TCGATCATGG GCGTGCGCGA GCTTTGGCTC
AACGTCGTGA AGCCTTGGCA GGAGCGGCGC CGGCTGCAAT CCGCCTGCGA CGACGAGGTC
GCCGCCAAGC GCGCGGCTGC GACAGCTACG GCGGCCGTTC CCCATCGCAT CAAGCGACGG
CACTCCCAGG GGTGA
|
|---|
| Protein sequence | MQRLLTTLSR GFKKWIGWKR LGIAASLAII AFAVTTLIRT LKGVDGSVIL TALTEIPPGH
IALAALCVIG AFCTLTFYDY FALRTIGKKH VPYRIAAMSA FTSYSIGHNI GATVFTGGAI
RFRIYSDYGL SAIDVAKICF LSGLTFWLGN LFVLGIGMTL HPAAASSMDQ LPPAVNQLIA
IGILGAIFAY LGWLAAGKNR RQLGQNGWKV VLPSAQLTLV QILIGVVDLG FCALAMYLLV
PSNPPIDFLS LSVVFILATL LGFASHAPGS IGVFDAAMLV ALPQFGREQL LATLLVFRVL
YFVIPFATAI SIMGVRELWL NVVKPWQERR RLQSACDDEV AAKRAAATAT AAVPHRIKRR
HSQG
|
|---|
| |