Gene BBta_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5469 
Symbol 
ID5150992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5689473 
End bp5690288 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID640560216 
ProductXRE family transcriptional regulator 
Protein accessionYP_001241338 
Protein GI148256753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC TCGCTTCGGC GCGCGCCGAC CGCGCCAAAC CCGTTCATGT CGGCGAGCAT 
CTGCGGCAAT GGCGGCAGCG GCGGCATCTC AGCCAGCTCG ATCTCGCGCT CGATGCGGAA
ATTTCCGCCC GGCATCTGAG CTTCGTGGAG ACCGGCCGGG CGGCGCCGTC GCGCGACATG
GTCCTCAAAC TGGCGGAGCG GTTGGACGTG CCCCTGCGTG AACGCAATGT GCTGCTGGTC
GCGGCGGGCT ACGCGCCCGC CTTTCAGCAG CGCCCGCTGG ACGATCCGGC GCTGAAGCCG
GCGCGCGAGG CAATGAACCT GGTGCTGACG GCGCATGAGC CCAATCCCGC GCTCGCGGTC
GATCGGCATT GGAACCTGGT CGCGGCGAAC CGCATGATCG CGCCGCTACT CGCCGGCATC
CCGGATCACC TGGTGGCGGC GCCGCTCAAC GTGCTGCGGG TGGCGCTTCA TCCGGAGGGC
CTGGCGGCGC GGACGGTGAA CCTGGCCGAA TGGAGCGGAC ATCTGCTGGA GCGGCTGCAT
CGGCAATGCG AAGCCACGGC CGACGCCGAT CTGCTGGCGC TCTATCAGGA GCTGCGATCC
TATCCGTTCC CGGCGCGATC CGGGCCGCTG GCGGCCGACA GCGTCGCGAT TCCGCTGCGG
CTCCGGGTCG GCAATGATGT GCTGAGCTTC TTCTCGACCA CCATGGTGTT CGGCACGCCC
GTGGACATCA CCCTGTCGGA GCTGGCCCTG GAAACCTTCT TCCCGGCCGA TGAGCTCACG
GCGAGCAAGC TCAAGGAGAT GGTTACCCTG CTGTGA
 
Protein sequence
MNQLASARAD RAKPVHVGEH LRQWRQRRHL SQLDLALDAE ISARHLSFVE TGRAAPSRDM 
VLKLAERLDV PLRERNVLLV AAGYAPAFQQ RPLDDPALKP AREAMNLVLT AHEPNPALAV
DRHWNLVAAN RMIAPLLAGI PDHLVAAPLN VLRVALHPEG LAARTVNLAE WSGHLLERLH
RQCEATADAD LLALYQELRS YPFPARSGPL AADSVAIPLR LRVGNDVLSF FSTTMVFGTP
VDITLSELAL ETFFPADELT ASKLKEMVTL L