Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5413 |
Symbol | |
ID | 5149470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5631860 |
End bp | 5632762 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560167 |
Product | putative nitrate ABC transporter ATP-binding protein (ntrC/D-like protein) |
Protein accession | YP_001241291 |
Protein GI | 148256706 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.756515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACA AGTTCATCTC GATCGAAGGC ATCGCCAAGC GCTACGACGG CGCGCGCAGC ACGACGATCT TCGAGAATCT GTGGCTCGGC ATGGCCCGCG GCGAGTTCGT CTGCGTGATC GGGCATTCCG GCTGTGGCAA GACCACCGTG CTCAACATCC TGGCCGGGCT GGATGTGCCG AGCGAGGGCG CTGTCATTGT CGACGGCCAG GCCATCGAGG GACCGAGCCT CGACCGCGCC GTGATCTTCC AGAGCCATGC GCTGTTGCCG TGGCGGACGG TGCTCGGCAA TGTCGCCTAT GCGATCTCGT CGAAATGGCG CAGATGGGAT CGCGCCAAGG TCAAGGCGCA TGCGCTCAAA TATATCGAGC TGGTTGGCCT CGCAGGCTCC GAGCACAAGC GGCCGTCCGA ACTGTCCGGC GGCATGAAGC AGCGCGTCGG CATTGCCCGG GCGCTGTCGA TCACGCCGAA GATCATGCTG ATGGACGAGC CGTTCTCGGC GCTGGACGCG CTGACGCGCG GCACCTTGCA GGACGAGGTC CGGCGCATCT GCGTCGAGAC CGGCCAGACC GTGTTCATGA TCACCCACGA CGTGGATGAG GCGATCTATC TCGCCGACAA GATCGTGCTG ATGACCAATG GGCCCGGTGC TGTCCTGGCC GAGATCGTCG AGAATCCGCT GCCGAAAGAC CGGCTGCGCG GTGACCTGCA TCGCCATCCG CTGTATTACG CGCTGCGCAA CCACATCATC GACTTCCTGG TCAGCCGCAG CAAGATCTTC ACCGCCGAGA CGCCGGATCA TGATCCGCGC AAGGTGCCGG TGGTGAAGAT CGGCCGGACG GAGCCGACGA TCGTCGCATC CAAGCCGGTC GACAGCGATG CGCCGCAGGC GGTCGCGCGC TGA
|
Protein sequence | MTDKFISIEG IAKRYDGARS TTIFENLWLG MARGEFVCVI GHSGCGKTTV LNILAGLDVP SEGAVIVDGQ AIEGPSLDRA VIFQSHALLP WRTVLGNVAY AISSKWRRWD RAKVKAHALK YIELVGLAGS EHKRPSELSG GMKQRVGIAR ALSITPKIML MDEPFSALDA LTRGTLQDEV RRICVETGQT VFMITHDVDE AIYLADKIVL MTNGPGAVLA EIVENPLPKD RLRGDLHRHP LYYALRNHII DFLVSRSKIF TAETPDHDPR KVPVVKIGRT EPTIVASKPV DSDAPQAVAR
|
| |