Gene BBta_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5413 
Symbol 
ID5149470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5631860 
End bp5632762 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID640560167 
Productputative nitrate ABC transporter ATP-binding protein (ntrC/D-like protein) 
Protein accessionYP_001241291 
Protein GI148256706 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID[TIGR01184] nitrate transport ATP-binding subunits C and D 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.756515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA AGTTCATCTC GATCGAAGGC ATCGCCAAGC GCTACGACGG CGCGCGCAGC 
ACGACGATCT TCGAGAATCT GTGGCTCGGC ATGGCCCGCG GCGAGTTCGT CTGCGTGATC
GGGCATTCCG GCTGTGGCAA GACCACCGTG CTCAACATCC TGGCCGGGCT GGATGTGCCG
AGCGAGGGCG CTGTCATTGT CGACGGCCAG GCCATCGAGG GACCGAGCCT CGACCGCGCC
GTGATCTTCC AGAGCCATGC GCTGTTGCCG TGGCGGACGG TGCTCGGCAA TGTCGCCTAT
GCGATCTCGT CGAAATGGCG CAGATGGGAT CGCGCCAAGG TCAAGGCGCA TGCGCTCAAA
TATATCGAGC TGGTTGGCCT CGCAGGCTCC GAGCACAAGC GGCCGTCCGA ACTGTCCGGC
GGCATGAAGC AGCGCGTCGG CATTGCCCGG GCGCTGTCGA TCACGCCGAA GATCATGCTG
ATGGACGAGC CGTTCTCGGC GCTGGACGCG CTGACGCGCG GCACCTTGCA GGACGAGGTC
CGGCGCATCT GCGTCGAGAC CGGCCAGACC GTGTTCATGA TCACCCACGA CGTGGATGAG
GCGATCTATC TCGCCGACAA GATCGTGCTG ATGACCAATG GGCCCGGTGC TGTCCTGGCC
GAGATCGTCG AGAATCCGCT GCCGAAAGAC CGGCTGCGCG GTGACCTGCA TCGCCATCCG
CTGTATTACG CGCTGCGCAA CCACATCATC GACTTCCTGG TCAGCCGCAG CAAGATCTTC
ACCGCCGAGA CGCCGGATCA TGATCCGCGC AAGGTGCCGG TGGTGAAGAT CGGCCGGACG
GAGCCGACGA TCGTCGCATC CAAGCCGGTC GACAGCGATG CGCCGCAGGC GGTCGCGCGC
TGA
 
Protein sequence
MTDKFISIEG IAKRYDGARS TTIFENLWLG MARGEFVCVI GHSGCGKTTV LNILAGLDVP 
SEGAVIVDGQ AIEGPSLDRA VIFQSHALLP WRTVLGNVAY AISSKWRRWD RAKVKAHALK
YIELVGLAGS EHKRPSELSG GMKQRVGIAR ALSITPKIML MDEPFSALDA LTRGTLQDEV
RRICVETGQT VFMITHDVDE AIYLADKIVL MTNGPGAVLA EIVENPLPKD RLRGDLHRHP
LYYALRNHII DFLVSRSKIF TAETPDHDPR KVPVVKIGRT EPTIVASKPV DSDAPQAVAR