| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5374 |
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| Symbol | ddl |
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| ID | 5150179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5598004 |
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| End bp | 5599107 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560131 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_001241255 |
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| Protein GI | 148256670 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0896032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACACA ACACGACGCG CGTGGCGATC CTGTTCGGCG GGCGCTCGGC CGAGCATGAC
GTGTCCCGCG CCTCGGCCGC CAACATCTTC CGGTCGCTCG ATGCGAGCCG ATACGCCGTC
ACCTTGATCG GCATCACGCC GGAGGGGCGC TGGGTGCTGG CCGACGCCGT CAACGCCAGG
ACAGCCCAGG CTTTGACCGT GCCGCCGGAC GGTCCGCAGA TCGTGCTGCT GCCGGCCGGC
CAGGGCCGCG CGCTGGTGCT CGGCGACGGC GCGGCCGCAC CGCGCGAACT CACCTTCGAT
GTCATCTTCC CGGTGCTGCA TGGTCCCAAC GGCGAGGACG GCACCATGCA GGGGGCGCTG
GAACTCGCCG ATGTCGCCTA TGTCGGCGCG CGGGTGATGG GATCGGCGGC GGCGATGGAC
AAGGACGTCG CCAAGCGCCT GCTGCGCGAT GCCGGCCTGC CGATCGTGCC CTTCGTCACG
ATGACGGCAG CGGCACCGGT GAGCTACGAG GACGCCGTCC ATGCCGTGGG CTGCTCTGAG
CTGTTCATCA AGCCGGCCAA TCTCGGCTCA TCGGTCGGCA TCTCCAAGGC GCGCACCCCG
CAGGAGTTCG CCGCCGCCTG CGATCTCGCA TTGCGCTTCG ACGGCAAGAT CCTGATCGAA
CGTTGCATCT CCCCGGTGCG CGAGATCGAA TGCGCCGTGC TGGAGCATGC CGATGGCGAG
GTCAAAGCCT CCGAGCTCGG CGAGATCGTG CCCGCGAGCA GCCACGGTTT CTATTCCTAC
GCGGCGAAGT ACACCGATGC ATCGGGGGCC TCGCTGCACG TCCCGGCGCA GGTCGAGCCT
GGCCTGGCGC AGCGCATCCG CAAGATGGCG ACCGAGGTGT TCGGCGTGCT CTGCTGCGAG
AGCCTCGCGC GCGTCGACTT CTTCGTCCAC GGCGAGGAGG TCTACGTCAA CGAGGTGAAC
ACCCTGCCCG GCTTCACCAA TATCAGCATG TATCCAAAGA TGTGGGAGGC CACCGGCCTG
CCCCAGCCGG CGCTGATGGA CGCCCTGATC GCGCACGCAT TGGCGCGGCA TGCGCGGCTG
AGGCAGCTGG CGTCACAGCG CTGA
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| Protein sequence | MAHNTTRVAI LFGGRSAEHD VSRASAANIF RSLDASRYAV TLIGITPEGR WVLADAVNAR
TAQALTVPPD GPQIVLLPAG QGRALVLGDG AAAPRELTFD VIFPVLHGPN GEDGTMQGAL
ELADVAYVGA RVMGSAAAMD KDVAKRLLRD AGLPIVPFVT MTAAAPVSYE DAVHAVGCSE
LFIKPANLGS SVGISKARTP QEFAAACDLA LRFDGKILIE RCISPVREIE CAVLEHADGE
VKASELGEIV PASSHGFYSY AAKYTDASGA SLHVPAQVEP GLAQRIRKMA TEVFGVLCCE
SLARVDFFVH GEEVYVNEVN TLPGFTNISM YPKMWEATGL PQPALMDALI AHALARHARL
RQLASQR
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