Gene BBta_5345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5345 
Symbol 
ID5149636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand+ 
Start bp5572267 
End bp5572863 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content68% 
IMG OID640560105 
ProductTetR family transcriptional regulator 
Protein accessionYP_001241229 
Protein GI148256644 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.922777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.179588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG GACGGCCGCG CGAATTCGAC ACTGAAAGGG CCCTTGAACT GGCGACCTCG 
CTGTTCTGGC AAAAGGGCTA CGAAGGAACA TCGCTCTCCG ATCTGACCGA GACGCTGGGC 
ATCACGCGGC CGAGCCTCTA CGCCGCCTTC GGCAACAAGG AAGCCTTGTT CCGCCTGGTA 
CTGCAACGCT ACGAGGCGAA GGCAGGCGCC TACCGCACCA AGGCGCTCAA GGCGCCGACG 
GCCCTTGAGG TCGCGCGGCA ACTCCTGGAA GGCGCAGCGG AGCTCCACGG CGACAAGGCA 
AATCCGGTCG GTTGCCTCGG CGTGCACGGC GCGCTGGCCT GCAGCGACGA GGCCGCCATG 
ATCCGCCGCG ACATGAGCGC GCATCGCATC GCCGGGGAGG CGGCCATCCG CCGGCGTCTG 
ACGCGGGCCA AGGCCGAGGG CGACCTGCCG CCCAATGCAA GTCCGTCAGA TCTTGCGCGC 
TATCTCTCGG TGGTGATCTA CGGCATGGCG GTGCAGTCCG TCGGCGGCGC CAGCCACGCG 
GAGCTGCGCC GCGTCGCGGC GATCGCGCTC AGCCAATGGC CCAAAAGCGC ACGTTGA
 
Protein sequence
MPTGRPREFD TERALELATS LFWQKGYEGT SLSDLTETLG ITRPSLYAAF GNKEALFRLV 
LQRYEAKAGA YRTKALKAPT ALEVARQLLE GAAELHGDKA NPVGCLGVHG ALACSDEAAM 
IRRDMSAHRI AGEAAIRRRL TRAKAEGDLP PNASPSDLAR YLSVVIYGMA VQSVGGASHA 
ELRRVAAIAL SQWPKSAR