| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5330 |
|---|
| Symbol | |
|---|
| ID | 5155986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5559682 |
|---|
| End bp | 5560680 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640560092 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241216 |
|---|
| Protein GI | 148256631 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.12369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.395647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAACC TCCTCACCGA TATCGCAGGC GTCCGCGTCG GCCACGCCGA TGATGCCGCG
CTTGCCTCCG GCGTGACCGC CATCCTGTTC GATCAGCCCG CGGTGGCCGC GATCGACATT
CGCGGTGGCG GGCCGGGCGT GCGCGAGGAT GCCCTGCTCG ATCCCGCCAA CACGGTGGAG
CGGATCGACG CCATTGCGCT GTCAGGCGGC TCGGCATTCG GGCTGGAGGC CGCGAGCGGC
ATCCAGGCCT GGCTTGCCGA GCAGGGCCGC GGCTTTGCGG TGCGCGATGC GCTGATCCCG
ATCGTGCCCG GCGCGATCGT GTTCGACCTG CTCAATGGCG GCAACAAGGC CTGGGGCCGC
TATGCGCCGT ATCGCGAGCT CGGCTATCGG GCGGCGGCCG CCGCCGGCCC CGGCTTCGCG
CTGGGGAGCG TCGGCGCCGG GCTCGGCGCC ACCACCGCCA ACCTGCAGGG CGGCCTCGGC
TCGGCATCGG CCACGACCAC CAAAGGCGTC AAGGTCGCGG CGATCGCCGT GGTCAATGCG
GTCGGCAGCG TCACCGTCGG CGATGGTCCG TGGTTCTGGG CCGCGCCCTA TGAGGTGGAT
GGCGAGTTCG GTGGCCGCGG CCTGCCGGCG GCGTTCACGC CGGACATGCT GGCGATGCGC
ATCAAGGGCG GTCCGGCCGC ATCGAGCGCG GAGAATACGA CGATCAGCCT GGTCGTGACC
GATGCCGTCC TGACCAAGGC TCAGGCCAAG CGGCTCGCGA TGATGGCGCA GACCGGCATG
GCGCGCGCGA TCTATCCGGT CCATCTGCCG CTCGACGGCG ATATCGTGTT CGCGGCGGCG
ACCTGCGCCA GGCCGATCGA GCCGCTGGTC GAGCTGAGCG AACTCGGCAT GGTGGCGGCC
AACGTGCTGG CGCGGGCGAT CGCGCGCGGT GTCTATCACG CCAAGCGGCT GCCGTTCGCA
GGCGCCCTGC CCTCCTGGCA GGACCGCTTC GGCGGCTGA
|
|---|
| Protein sequence | MQNLLTDIAG VRVGHADDAA LASGVTAILF DQPAVAAIDI RGGGPGVRED ALLDPANTVE
RIDAIALSGG SAFGLEAASG IQAWLAEQGR GFAVRDALIP IVPGAIVFDL LNGGNKAWGR
YAPYRELGYR AAAAAGPGFA LGSVGAGLGA TTANLQGGLG SASATTTKGV KVAAIAVVNA
VGSVTVGDGP WFWAAPYEVD GEFGGRGLPA AFTPDMLAMR IKGGPAASSA ENTTISLVVT
DAVLTKAQAK RLAMMAQTGM ARAIYPVHLP LDGDIVFAAA TCARPIEPLV ELSELGMVAA
NVLARAIARG VYHAKRLPFA GALPSWQDRF GG
|
|---|
| |