Gene BBta_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5275 
Symbol 
ID5155953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5504778 
End bp5505626 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content66% 
IMG OID640560042 
Producthypothetical protein 
Protein accessionYP_001241166 
Protein GI148256581 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.224693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC GTATCTCCCA TTCCACCACT TACCGCTACG AGCCGGCGGC GACTGGCGCC 
ATCCAGATCA TCCGCATGAC GCCCGGCAGC CATGACGGCC AATATGTGGC GGAGTGGCAG
ATCGATGTGT CGACCGATTC CCGGCTCGAT ATGCACGAGG ACGCGTTCGG CAACGTGACC
CATGTGATCA CCCATGGCGC GCTGCAGGAC CTCACGATCA CCGCCGAAGG CCTGGTCGAG
ACGCACGACA CCGGCGGTGT GCTGAAAGGC GCGGATGAGC GGTTTCCGCC CGGCTTCTTC
CTGCGAACCA CCCCGCTGAC GGCGGCCAAT GCCGCCATGG CTGCCGTGGT GCGCGACCTG
CGCGCGGAAT CCGAGAGCGA CGCGCTCGGC TTCCTGCACA CCCTGATGAC GCAGGTCTAT
GAGCACATGA CCTTCGACGA AGACCCGACC CACAGCGGCA CTTCGGCAGC CGAGGCTTTT
GCCTTGAAGC GGGGCGTCTG CCAGGATTAC GCCCACATCT TCATTGCCAG CGCACGCGCC
GCGGGCATCC CGGCCCGCTT CGTGTCAGGC CACTTCCTGC GCTCCGATGG TGCAGTGCAT
CAGGAAGCTG GCCACGCCTG GGCCGAAGCC TATGTGCCGA ATCTCGGCTG GGTGGGTTTC
GACGCCGCGA ACTGCATCTG CACCACCGAC GCCCACGTTC GGGTGGCGAT CGGGCTGGAT
TATCTCGGCG CGACGCCGGT GCGCGGCACC CGTTACGGCG GCGGGACCGA GACGCTGACC
GTGAAGGTGA AGGTCGAGCA GGTCGGCCGC GGCGGGCAGT CGCAATCGCA GTCGCAGCGG
CAGTCCTGA
 
Protein sequence
MRLRISHSTT YRYEPAATGA IQIIRMTPGS HDGQYVAEWQ IDVSTDSRLD MHEDAFGNVT 
HVITHGALQD LTITAEGLVE THDTGGVLKG ADERFPPGFF LRTTPLTAAN AAMAAVVRDL
RAESESDALG FLHTLMTQVY EHMTFDEDPT HSGTSAAEAF ALKRGVCQDY AHIFIASARA
AGIPARFVSG HFLRSDGAVH QEAGHAWAEA YVPNLGWVGF DAANCICTTD AHVRVAIGLD
YLGATPVRGT RYGGGTETLT VKVKVEQVGR GGQSQSQSQR QS