Gene BBta_5274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5274 
Symbol 
ID5155952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5503644 
End bp5504588 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID640560041 
Producthypothetical protein 
Protein accessionYP_001241165 
Protein GI148256580 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.165267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGC GCACCGCCGA AAACCTGTAC TGGCTGGCCC GCTATGTCGA GCGCGCCGAG 
TATCTCGCCC GCACCATCGA CGCCACCCTG CGCGTCACCG CCCTTCCCGC GGCCTATATC
GGCAAGACCA ATGAGTGGGA ATCGGCGCTG ATGACCGCCG GCGTCAATGT CAGCTTCTAC
GAGGTCTATG CCGAGGCCAA CGAGCAGAAC GTCATCGAAT ATCTGTCCTT CAACCAGTCC
AACCCGTCCT CGATCAAGAA CTGCATCGAG GCTGCGCGCC TCAATGCCCG CTCGGTGCGC
ACGGCGCTCA CCTCCGAGAT GTGGGACACC CTGAACGGCT CCTGGATCGA GCTTCAGGAG
GTATGGAGCA AGGGCACCAA GACGCGCGAG GAGCTGGCGC GCTTCCTGCG CTTCGTGCAG
GAGACCTCGC TGCGCTTCGA CGGCTCGGCC TACCGCACCA TGCTGCGCAA CGACGCCTAT
TGGTTCTCGC GGCTCGGGCT GCATCTGGAG CGCGCCGACA ACACCGCGCG CATTCTCGAC
GTGAAATATC ACGTGCTGCT GCCCGAGGAG GAACATGTCG GCGGCCCGCT GGACTATTAC
CAATGGACCT CGATCCTGCG CTCGGTCTCG GCGCTCACCG CCTATCATTG GGTGTATCGC
GAGACGCTGA AACCCTGGCT GATCGCGGAC CTCCTGATCC TCAACGACAC GCTGCCGCGC
TCACTCGCCA GCTGCTACGG CAACCTCGTG CGCAACCTCG ACCAGATCGG CGTCGCTTAT
GGCCGCCAGG GGGCGGCGCA GCGCCATGCC CGCGGCGTCC GCAACCGGCT GGAGCATTCC
AACATGGACG ACATCTTCCA GCGCGGCGTC CACGAGTTCA TCCAGGAGTT CATCGGCGAC
AATTCGCGGC TGGGGGAGAT CATCACCAAG CAATATCTGA TCTGA
 
Protein sequence
MLSRTAENLY WLARYVERAE YLARTIDATL RVTALPAAYI GKTNEWESAL MTAGVNVSFY 
EVYAEANEQN VIEYLSFNQS NPSSIKNCIE AARLNARSVR TALTSEMWDT LNGSWIELQE
VWSKGTKTRE ELARFLRFVQ ETSLRFDGSA YRTMLRNDAY WFSRLGLHLE RADNTARILD
VKYHVLLPEE EHVGGPLDYY QWTSILRSVS ALTAYHWVYR ETLKPWLIAD LLILNDTLPR
SLASCYGNLV RNLDQIGVAY GRQGAAQRHA RGVRNRLEHS NMDDIFQRGV HEFIQEFIGD
NSRLGEIITK QYLI