| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5257 |
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| Symbol | |
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| ID | 5154675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5483114 |
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| End bp | 5484004 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560026 |
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| Product | putative ABC transporter (permease protein) |
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| Protein accession | YP_001241150 |
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| Protein GI | 148256565 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.216925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.133052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG TCACCACTCC TGAGCCGTCG ATTCCGGTCA CCACGCGACT GGGGCCCAAA
TTCGGCTTTC TCACCTCGAC CCCGATCATC GCCGTGGCCA CGATCTGCCT GTCGCTGATC
GTGCTGGTCT CGATCCTGGC GCCGCTGCTG GCGCCCCATG ATCCGGTGCT GCTGGCGCCG
GCACAGCGGT TGAAGCCGTC GAGCGCGCAA TACCTGCTCG GCACCGACGC CTATGGCCGC
GACCTGTTGT CGCGCACCAT CTATGGCGGC CGGATCTCGT TGCTGGTCGG CGTCGGCGCC
GCCGTTATCT CGATCGCGAT CGGGCTGGTG ATCGGCCTCG TCTCCGGCTT CTTCCGCTGG
GTCGACGCCA TCATGATGCG GGTGATGGAC GGCCTGATGG CGATCCCGAG CATCCTGCTC
GCGATCGCCG TGGTGTCGCT GTCGGGCGCC AGCGTCGCCA CCGTGATGAT CGCGATCACC
ATCGTCGAGA TTCCGCGCGT CGCGCGCCTG GTCCGCTCGG TCGTGCTGAC CGCGCGCGAG
GAGCCCTATG TCGAAGCGGC GATCTCATTG GGCACCTCGA TGCCCAAGAT CATGTGGCGG
CATCTGATGC CGAACACGAT CGCGCCGCTG ATCGTCCAGG GCACCTATAT CTGCGCCGCC
GCGATCCTGA CCGAGGCGAT CCTGTCGTTC CTCGGCGCCG GCATCAGCCC GGAGACGCCG
ACCTGGGGCA ACATCATGGC CGAGGGTCGC TCCTACTTCC AGATCAAGCC GTCGCTGATC
TTCTGGCCGG GCCTGCTGCT GTCGATCGCC ATTCTCTCGA TCAACCTGAT CGGCGACGCC
GCCCGCGACG CACTCGACCC GCGCATGAAG CAGCGCGAGG CCGGCAAGTG A
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| Protein sequence | MAIVTTPEPS IPVTTRLGPK FGFLTSTPII AVATICLSLI VLVSILAPLL APHDPVLLAP
AQRLKPSSAQ YLLGTDAYGR DLLSRTIYGG RISLLVGVGA AVISIAIGLV IGLVSGFFRW
VDAIMMRVMD GLMAIPSILL AIAVVSLSGA SVATVMIAIT IVEIPRVARL VRSVVLTARE
EPYVEAAISL GTSMPKIMWR HLMPNTIAPL IVQGTYICAA AILTEAILSF LGAGISPETP
TWGNIMAEGR SYFQIKPSLI FWPGLLLSIA ILSINLIGDA ARDALDPRMK QREAGK
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