Gene BBta_5171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5171 
Symbol 
ID5153955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5398668 
End bp5399057 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content65% 
IMG OID640559945 
Producthypothetical protein 
Protein accessionYP_001241070 
Protein GI148256485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00743925 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.173258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA AAATGTCCGT CGCGCTGCTC GCCGCTTCCA TCCTGGCTGC GCCTGCCTTC 
GCCGCTGGTC CTGCAAAAAC CGATACGTCC GCGAAGTCCA CGCAGACCAC GGGCACGGCC
AAGCCCGATG CAACGAAGAC CGAGGCGACG AAGACCGATG CCTCCAAGAC CGTCGGCGGG
ACGCAGGCTG GCGACAAGAG CAACGAGATG AAGCCGGCCG TCGACAAGGC GAAGGGCAAG
CCTCATGCGT CGCTGCTCCG CCACAAGCAT CGCCACGTTG CTCACCTTCG CCATCACCAC
AACGTGAAGG TCTCGCACGC CGCCGTGAAG AAGTCGGCCC ACGCCAAACT GAGCCTCAAG
CGTGTGACCC CGGCGACCCG CCGCGGGTGA
 
Protein sequence
MLKKMSVALL AASILAAPAF AAGPAKTDTS AKSTQTTGTA KPDATKTEAT KTDASKTVGG 
TQAGDKSNEM KPAVDKAKGK PHASLLRHKH RHVAHLRHHH NVKVSHAAVK KSAHAKLSLK
RVTPATRRG