Gene BBta_5145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5145 
Symbol 
ID5153518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5377069 
End bp5377872 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID640559920 
Productputative Short-chain dehydrogenase/reductase SDR 
Protein accessionYP_001241047 
Protein GI148256462 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.645114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0551529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC ACCAGCGTTT CGCAGTTGTC ACCGGCGCGT CGTCGGGGAT CGGTGTCGCC 
TATGCGGAGC GGCTCGCCGC CCGCGGCTAT TATCTGATCC TCGTCGCGCG CCGCCGCGAG
CGTCTCGAAG AGACCGCGCG CAACATTCGC GCCAAGACCA ATGTCACGGT CGAGATCGTG
ACGGCCGACC TCGGCGACAG CAACGACCTG TCGCGCGTCG CCACGCTGAT CGAGGGGCGC
GAGGACATCG ATCTTCTCGT CAACAATGCC GGCCTCGGCG CGCTCGGCCT GACCGCTCAG
GTGTCCGCCG CGGCACTCGA CAATCTGATC AAGATCAACG TTCAGGCGCT GACGCGCCTG
ACCCATGCGG CGCTGCCTGG TTTCCTGCGC CGCGACCGCG GCACGATCAT CAACATCGCC
TCGATCATCG CGCTGATGCC GACCCCGACC GGCGCGGGCT ATTCAGGTTC GAAGGCGTAT
GTGCTGAACT TCACCCGATC GCTGCAGATG GAGCTGGCAA ACACCAAGGT GAAGGTCCAG
GCCGTCCTTC CCGGCCCGGT CCGCACCGAG TTCTTCGAAG CCTCCGGCCT GAAGCAGGCG
CCCTTCCCCG ACGAATTGTT CATGACGTCC GAGGAACTGG TCGACACGGC GCTCACGGCG
CTGGATCAGG ACGAACTCAT CTGCCTCCCC GCGCTGCAGG ACCTGTCGGC GTGGACAGCC
TACGAAGCCG CTCGCGGCGA GCTGATCCGC GCGCTGACGC AGTCCGGCCG GCCGGCCGCG
CGCTACGCCA AGCGGGTCGG CTGA
 
Protein sequence
MSDHQRFAVV TGASSGIGVA YAERLAARGY YLILVARRRE RLEETARNIR AKTNVTVEIV 
TADLGDSNDL SRVATLIEGR EDIDLLVNNA GLGALGLTAQ VSAAALDNLI KINVQALTRL
THAALPGFLR RDRGTIINIA SIIALMPTPT GAGYSGSKAY VLNFTRSLQM ELANTKVKVQ
AVLPGPVRTE FFEASGLKQA PFPDELFMTS EELVDTALTA LDQDELICLP ALQDLSAWTA
YEAARGELIR ALTQSGRPAA RYAKRVG