Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5145 |
Symbol | |
ID | 5153518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5377069 |
End bp | 5377872 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640559920 |
Product | putative Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001241047 |
Protein GI | 148256462 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.645114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0551529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATC ACCAGCGTTT CGCAGTTGTC ACCGGCGCGT CGTCGGGGAT CGGTGTCGCC TATGCGGAGC GGCTCGCCGC CCGCGGCTAT TATCTGATCC TCGTCGCGCG CCGCCGCGAG CGTCTCGAAG AGACCGCGCG CAACATTCGC GCCAAGACCA ATGTCACGGT CGAGATCGTG ACGGCCGACC TCGGCGACAG CAACGACCTG TCGCGCGTCG CCACGCTGAT CGAGGGGCGC GAGGACATCG ATCTTCTCGT CAACAATGCC GGCCTCGGCG CGCTCGGCCT GACCGCTCAG GTGTCCGCCG CGGCACTCGA CAATCTGATC AAGATCAACG TTCAGGCGCT GACGCGCCTG ACCCATGCGG CGCTGCCTGG TTTCCTGCGC CGCGACCGCG GCACGATCAT CAACATCGCC TCGATCATCG CGCTGATGCC GACCCCGACC GGCGCGGGCT ATTCAGGTTC GAAGGCGTAT GTGCTGAACT TCACCCGATC GCTGCAGATG GAGCTGGCAA ACACCAAGGT GAAGGTCCAG GCCGTCCTTC CCGGCCCGGT CCGCACCGAG TTCTTCGAAG CCTCCGGCCT GAAGCAGGCG CCCTTCCCCG ACGAATTGTT CATGACGTCC GAGGAACTGG TCGACACGGC GCTCACGGCG CTGGATCAGG ACGAACTCAT CTGCCTCCCC GCGCTGCAGG ACCTGTCGGC GTGGACAGCC TACGAAGCCG CTCGCGGCGA GCTGATCCGC GCGCTGACGC AGTCCGGCCG GCCGGCCGCG CGCTACGCCA AGCGGGTCGG CTGA
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Protein sequence | MSDHQRFAVV TGASSGIGVA YAERLAARGY YLILVARRRE RLEETARNIR AKTNVTVEIV TADLGDSNDL SRVATLIEGR EDIDLLVNNA GLGALGLTAQ VSAAALDNLI KINVQALTRL THAALPGFLR RDRGTIINIA SIIALMPTPT GAGYSGSKAY VLNFTRSLQM ELANTKVKVQ AVLPGPVRTE FFEASGLKQA PFPDELFMTS EELVDTALTA LDQDELICLP ALQDLSAWTA YEAARGELIR ALTQSGRPAA RYAKRVG
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