Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5139 |
Symbol | |
ID | 5153454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5371235 |
End bp | 5372434 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640559915 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_001241042 |
Protein GI | 148256457 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0630041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGTCTT CAGCTCAGCT CCGAAAGAAT ACACCCATGC TGTCTTTATC CGGCACGTCG TCCGACCCGA TCCTGACCGA TCAGTTGCTG TCCGAACTGC GTCAGGAGTT TGCCGCGACC GCCGCCCAGC ACGACGCGGA TGGAAGTTTT CCGTTCGCCA ATTTCAAGAG GCTGGCCGAA GCCAGGCTGC TGGCACTGAC CGTGCCCAAG CGCTTCGGCG GGCTCGGCGG CGGAATCTCC GAGGCCGCGC GCTTGGTCGC CGCGGTCGGG GCCGGCGAGG CTTCCACAGG GCTCGTGCTG CAGATGAACT GCATGATGCA TTATCTGCTC GGGCGGCGTC AGCCGCCCGG CTACGACGCG ATCGCGCGCG CGGCCGTCGC AGGCACCGGC ACGGTGAACG CGCTTCAGGC CGAGCCGGAC CTCGGCTCGG TGGTCCGCGG CGGACTGCCC GGGACCGTTG CGTCGCGATC CGCCGATGGG ACGTGGCGGA TCAATGGCCG CAAATCCTAT GCGACCGGCA GTCCGATCGT CGGATGGTGG CTGACATTGG TGCGCACCGA CGAGGATACG CCGCGCGTCG GCACCGTCAT CGTGCCCGCA GCTTCGCCGG GCATCAGCGT GGTGCCGAGC TGGAATCACG CCGGCCTGCG CGCCACCGCC AGCCACGAAT TGCGGTTCGA CAATGTCGTC CTGCCCGCGG GCGCCGATCA GGCGCTGCTG CCGGCCGGTT CGCCGGAACA GGTCGCCGGT CGCGCGCTGG TCGACGAATG GTTCTGCCTC CTGACGGCGG CCTTGTACGA CGGCATCGCG AGGGCGGGGC GGGACTGGCT GCTGCATTTC CTGCATTCCC GCGTTCCCAG CAATCTCGGC CAGCCGCTCG CCACCGTGCC GCGCCTGCAG GGCGTCGTCG GAGAGATCGA GTCGCTGCTG CTGATCAATC GCTCGCTGAT CGACGACGCG ATCCTGCGCG CGGAGGGCGC ATCGGAGCCC GATCAGCTTC GCGCGCAGCT GGTCAAGCAT GTGGTCACCA ACAATGTCGT GCGCGCGCTC GAACTCGCGC TCAGCATCAC CGGCAATCAC GGCCTTGACC GCGCCAATCC GCTGGAACGG CACTACCGCG ACGCGCTGTG CGGGCGTGTG CATTCGCCGC AATCCGATTC CATCCTCACC AATGCCGGAC GCGCCGCCTT GGCGGCCTGA
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Protein sequence | MTSSAQLRKN TPMLSLSGTS SDPILTDQLL SELRQEFAAT AAQHDADGSF PFANFKRLAE ARLLALTVPK RFGGLGGGIS EAARLVAAVG AGEASTGLVL QMNCMMHYLL GRRQPPGYDA IARAAVAGTG TVNALQAEPD LGSVVRGGLP GTVASRSADG TWRINGRKSY ATGSPIVGWW LTLVRTDEDT PRVGTVIVPA ASPGISVVPS WNHAGLRATA SHELRFDNVV LPAGADQALL PAGSPEQVAG RALVDEWFCL LTAALYDGIA RAGRDWLLHF LHSRVPSNLG QPLATVPRLQ GVVGEIESLL LINRSLIDDA ILRAEGASEP DQLRAQLVKH VVTNNVVRAL ELALSITGNH GLDRANPLER HYRDALCGRV HSPQSDSILT NAGRAALAA
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