Gene BBta_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5092 
Symbol 
ID5151924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5315957 
End bp5316460 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID640559867 
ProductMarR family transcriptional regulator 
Protein accessionYP_001240996 
Protein GI148256411 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.636455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG GCGGTGCTGG GCCTGCGGAA TTGGACCTGC GGCAGGACTC CCTCGGCTAT 
GCCATCAAGC GCGCACAGGT GCGCACCTAC GAGGTGCTGT TTGCCACCCT TGGCCCGGAC
GCGATTTCAC CGGCACGGAT GACGGCTCTG TCCATCATCG GCGCGCAGCC GGGCATCAAC
CAGTCGGCGC TGGCCGAGCA GCTTCGCGTC ACCCGCCCGA GCATGGTGAA GGTGATCGAT
AGTCTTGAGG GGCTCGGCCT GGTGGAGCGT CGCGCGATCC CGGGAGACCG CCGCAGCTAC
TCGCTGGCGC TCACCGAGCA GGGACGACGC GAACTGCGCG ACATGCACGA AAAGACTCGG
CAGTACGAGG CACGCATTGC CGAGCGCTTG ACGGCGCAGG AGCGCGCCCT GTTGATCTCA
TTGCTGGAGA AGGTCGCAGT GTCCGCGGTC CCGCCATCCG CGCCAGAGCT TGCGGCGGGC
AAAGCGGAAG ACCAGGGACC TTAG
 
Protein sequence
MSDGGAGPAE LDLRQDSLGY AIKRAQVRTY EVLFATLGPD AISPARMTAL SIIGAQPGIN 
QSALAEQLRV TRPSMVKVID SLEGLGLVER RAIPGDRRSY SLALTEQGRR ELRDMHEKTR
QYEARIAERL TAQERALLIS LLEKVAVSAV PPSAPELAAG KAEDQGP