| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4907 |
|---|
| Symbol | |
|---|
| ID | 5156187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5147688 |
|---|
| End bp | 5149046 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640559705 |
|---|
| Product | putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator |
|---|
| Protein accession | YP_001240835 |
|---|
| Protein GI | 148256250 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.412473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TCCTGATCGT CGATGACGAC GCCGCGCTGC GCGACGGTCT CGCGGAGACG
GTGACGGATC TCGGTCATCG CGCCGTGACG GCGGCCTCCG GCCGCGAAGC GATCGGCATG
CTGTCGTCCG ACACCGATGC CGTGCTGCTC GACCTCCGCA TGCCCGGGAT CGACGGCATC
GAGACCCTGC GCCGCATCCG CGCCGGCGGC GACGCGCCGC CGGTGATCGT GCTGACCGCC
TATGCAAGCC CGGAGAACAC GATCGAAGCG ATGCGGCTCG GCGCCTTCGA TCATCTGCTC
AAGCCGATCG GCCGGGATGC GTTGCGTGAG CTGATCGAGC GGCTGCCGCC ACGCCGGCGT
CAGCGGCGCG ACAGCGGCCG GGTTGGCGAC AGCGGACTGA TCGGCACCAG CGAAGCGATG
CGCCGGGTGC AGAAGACCAT CGGGCTTGCC GCCGATGCCG ATGCGACGGT GCTGATCCGC
GGCGAAACCG GCACGGGCAA AGAGCTCGTC GCGCGCGCGC TGCATGTCCA CAGCCGCCGC
AGCACGGCTC CCTTCGTCGC CCTCAACTGC GCAGCGATCC CGCAGGATCT GCTCGAAAGC
GAACTGTTCG GCCACATCAA GGGCTCGTTC ACCGGCGCCG CCTCGGACCG GTCGGGCGCG
TTCCGCGATG CCGGTGCCGG CACGCTGTTC CTCGACGAGA TCGGCGACAT GCCGCTGTCG
ATGCAGGCGA AGATCCTGCG GGCCCTGCAA GAGCGGATGA TCACGCCGGT CGGCGGCAAG
CCGATCAAGG TCGCCGCCCG CGTCGTTGCC GCGACCCATC GCGATCTCGC CAGGCAGGTG
GCGAGCGGCG CATTTCGCGA GGATCTCTAT TACCGTCTGA ACGTGATCCC GATCGAGCTG
CCGCCGCTCC GCGAACGCAC CCAGGACATC CTGCCGCTCG CCGATCATTT TCTGGCGCAG
TGCTCGGACG GCCGGCCGCA ACCGCAATTG AGCGATCGCG CCATCGACAA GCTCGTGCAT
GCGCCTTGGC CGGGCAATGT GCGCGAGCTG CGCAACGCGA TCCAACGCGC CTGCGTGCTG
ACACGCGGCG CCCTGATCGA TGCCGATGAC ATCGACATCG GCGCCGTGCC GGCGAACGAC
GAGGCAGAAC CGGCGACGGA CTTGCCCGCC GCGGTCGCGC GTCTCGAGGA AGGCATGATC
CGCCGTGCGC TTGCGGCCTG CGGCGGCAAC CGCACCGAAG CCGCGCGGCA GCTCAACATC
AACCGGCAGC TGCTCTACAC CAAGATGCAG CGCTACGGCC TCGTCGAGGA CGCCACGTCA
GGAAATCTGA CGTGCGCCGT CGCGAAAGAC GACGGCTAG
|
|---|
| Protein sequence | MATILIVDDD AALRDGLAET VTDLGHRAVT AASGREAIGM LSSDTDAVLL DLRMPGIDGI
ETLRRIRAGG DAPPVIVLTA YASPENTIEA MRLGAFDHLL KPIGRDALRE LIERLPPRRR
QRRDSGRVGD SGLIGTSEAM RRVQKTIGLA ADADATVLIR GETGTGKELV ARALHVHSRR
STAPFVALNC AAIPQDLLES ELFGHIKGSF TGAASDRSGA FRDAGAGTLF LDEIGDMPLS
MQAKILRALQ ERMITPVGGK PIKVAARVVA ATHRDLARQV ASGAFREDLY YRLNVIPIEL
PPLRERTQDI LPLADHFLAQ CSDGRPQPQL SDRAIDKLVH APWPGNVREL RNAIQRACVL
TRGALIDADD IDIGAVPAND EAEPATDLPA AVARLEEGMI RRALAACGGN RTEAARQLNI
NRQLLYTKMQ RYGLVEDATS GNLTCAVAKD DG
|
|---|
| |