Gene BBta_4906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4906 
Symbol 
ID5156186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5146216 
End bp5147703 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content68% 
IMG OID640559704 
Productputative two-component system sensor protein 
Protein accessionYP_001240834 
Protein GI148256249 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.419562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGCAGGCTC AGTCATCCGA TGTCACTGCG GACCATTCGA TGCGCTCCCT TCGTTCGCGG 
CTGTCAGCGC TCTGGCTCAT GCTGGCGATG TCGGGCGCAG CGACGGCCTA TCTCCTGCTC
GAATCGTTTC AACAATCGTC CGAAGCGCGC GTGGCGCGGG CGCAGGACCT CGTCGTCCGC
AGTTGCCGCG ACATCGCCGA CCGCTATCAG TTCTTTGTCA CCGGCTGGAG CGGCAGCGCG
TCCATCGACG ACAGGCTCCG GCAGGACCTG CTGCCGGTGA TCCGCTCGGC TCTGGCAGGC
GCGCCCGGCG TCGAAGGTGG CATCTGGCAG GCCCAAAGCG GCTCGCTCGC TTATGGCTAC
CCGACCTATG AGGGCACGGG GCCGAAAACC GATCTGCCGG CCGCCGAGCT CGGCGTGATC
GAACAGGTCA ATGCCGAAGC CAGGCGCAGC GGGCGTCCCG CGACGATCCG GAACGACGGC
CGCTCGCAGA GCCTAATCGT CCATGCCTGC CCGTTGCGCG GCCCTCTTCA GGACGTCACC
GCCTGGACGA TGACCCGGGC CGCAACCGCC GAAGGCCCGG CCTATACGCA TCTGCTCATC
GGGCTCATCG TCCTCGCTCT GACGCTGCTC GGCTCGGCGA TCTGGCTCGC CTGGATTCTC
GTGTCGTGGT CGCGTCGGAT CGCAGCCATC GAGACGGCGC TGGGCGGCGC GACCGGTACG
GCCGACCTGC CACATCTGCC GCAGACCGGC GCACGGGAGC TTGATCGCCT GGTCGACGCC
GTCAACGATG CCGGCCACCG TCTCTCGGCC GAGCGCAGGC GCGCCGCCGC AGCCGAGCGG
CTGGCCGCCG TCGGGCGGCT GTCCGCCAAC CTCGCCCACG AGATCCGCAA CCCGATCGCA
GCGATGCGGC TGAAGGCGGA GAATGCGCTC GCCTCCTCCG ACCCGGCGCG CAAAAGCAGC
GCCCTCGAAG CGATCCTGCA ACAGGTGGCG CGACTCGATG CGCTGCTGCG CGATCTGCTC
GCCACGACGC AGGCCGTCCA GCCGACGCCG CGCAATGTCG AGCTCGAAGG CTTTCTGCGG
TCGACGATCG ACGCGCATCG CGAGCTCGCC GCCCATCATG CCCTCGCACT CCGCAGCGTC
TGCTCTTCCC CGCGTGCCGC CTGCTTCGAT CCCTCACAAT TGCAGCGCGC CCTCGACAAT
CTGATCCTGA ACGCGATCCA GAACACGCCC GCAGGCGGCG AGATCGTCGT CGCGGCGGAG
ATCCACGGTG GACGCCTGCT GTTTCGTGTC ACCGACAGCG GCCCTGGCGT GGACGCCGGC
ATCAGGGATC GCCTGTTCGA GCCGTTCGTC AGCACCCGCG CGGACGGCAC CGGTCTTGGC
CTTGCCATCG TCCGCGAGAT CGCGCGGGCG CATCAGGGCG AAGCTCGGCT CGGACAGACC
CATCACGGCA ACAGCTTCGA GATTTCCCTG CCATGGCAAC CATCCTGA
 
Protein sequence
MQAQSSDVTA DHSMRSLRSR LSALWLMLAM SGAATAYLLL ESFQQSSEAR VARAQDLVVR 
SCRDIADRYQ FFVTGWSGSA SIDDRLRQDL LPVIRSALAG APGVEGGIWQ AQSGSLAYGY
PTYEGTGPKT DLPAAELGVI EQVNAEARRS GRPATIRNDG RSQSLIVHAC PLRGPLQDVT
AWTMTRAATA EGPAYTHLLI GLIVLALTLL GSAIWLAWIL VSWSRRIAAI ETALGGATGT
ADLPHLPQTG ARELDRLVDA VNDAGHRLSA ERRRAAAAER LAAVGRLSAN LAHEIRNPIA
AMRLKAENAL ASSDPARKSS ALEAILQQVA RLDALLRDLL ATTQAVQPTP RNVELEGFLR
STIDAHRELA AHHALALRSV CSSPRAACFD PSQLQRALDN LILNAIQNTP AGGEIVVAAE
IHGGRLLFRV TDSGPGVDAG IRDRLFEPFV STRADGTGLG LAIVREIARA HQGEARLGQT
HHGNSFEISL PWQPS