Gene BBta_4905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4905 
Symbol 
ID5149642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5143653 
End bp5146121 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content67% 
IMG OID640559703 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001240833 
Protein GI148256248 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.28937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG CGGACGCGCC ACGAGACGAA GTCGTCCCCG ATATTGCCGG CGCGGCCGCG 
TTGCGCCAGC ATATTGAGGA GATCGCGCGC GATCGCGACC AGGCCTATCG AGCGCTGCAG
GAGCGCGAGG CCGAGCTGGC ACGCATCCAG CGCATCGCGC GGGTCGGCGG CGTCGAGGTC
GATCTCCGGG AAGGCTTTCG CAACCGCCGC TCACCCGAAT ACCTGATCAT TCACGGCCTG
CCAGAAGAGG CTGCCAACGA GACCCACGAG GACTGGGTCA ACCGGGTGCA TCCTGACGAT
CGCATCAAGG CCGAGCAGGA CTTCATCGCC GCGGTCAACA GCAAGCAGGA AGACTACACC
ACCGAATACC GCATCATCCG GCCGAGCGAC GGCGAGATCC GCTGGATCCG CGTCATCGCC
CGCATCGAGC GCGACTGGAA CGGTCGTGCC ATCCGCCTGG TCGGCGCGCA TATCGACGTC
ACCGACCAGA TGCTCGCACA GGCCAAGCTG CGCGAGAGCG AGGAGCGCTT CCGGCTGATC
GCCGACAGCG CGCCGGTGCC GATCTGGCTG ACAAGGCTCG ACCGCACCCG CTCCTTCGTC
AATCGCGCCT ATGTCGATTT CCTCGGCCTG TCTCACGACG AGGCGCTCGC CTTCGACTGG
CGCAAGGCGC TGCATCCCGA GGACCTGCCG CGCATTCTTG CCCAGCAGCA GACGGGCGAG
TGCTCGCTGA AGCCGTTCTT CCTCGAGGCG CGCTATCGAC GGGCCGACGG GCATTGGCGC
TGGCTGCGCT CGGAGTCGCA GCCACGCTGG GACGCCAACG GCCAGCACAT CGGCTTCATC
GGCGTCGCCC ATGACGTGAC CGCCGCCAAG CAAGGCGAGA TCGAGCTCCG CCGTATCAAC
GAGACGCTGG AAGAGCGCAT CCGGGAGCGG ACCGCGCAGC TCGAAGCCAA TGAGGCGCGG
ATGCGCGCCA TCTTCGACAC CAGCAATCAG TATCAGGCCA TCCTCGACAC CGAGGGCAGG
ATCACGCATG TCAACCGCAT CGCGGTCGAC GGCATGCGCG CCGGCGGCGT CGATGTCATC
GGCCATCCGC TGTGGGACGC GCCCTGGTTC GTGCACACGC CCGGCGTGAG CGAGATGCTG
CGCAAGGCGT TTGCGCGGGT GCTCGCCGGC GACAGCTTCC GCACCGAGGT GCGGCTCGAC
TTCGCCAATG GCGACCGCCA CTTCGAACTG TCGATGCGGC CGCTGTTCGA CCAGCATGAT
GCGATCATGG GCGCGGTCGC CGAAGCCGTC GACATCACCG AGCGCATCCA GGGCGAGGAG
CTGCTGCGGC AATCCCAGAA GATGGAGGCG GTCGGCCAGC TCACCGGCGG CGTCGCGCAC
GACTTCAACA ATCTGCTCAC GATCATCCGC TCGGCCACCG ACTTCCTGCG CCGCCGCGAT
CTGCCGGAAG AACGGCGACG GCGCTATGTC GACGCGATCT CGGAGACGGT GGAGCGGGCC
TCGAAGCTCA CCGGGCAGCT CCTGGCGTTC GCGCGCCGGC AGCCGCTGAC GCCGCAGGTG
TTCAATGTCG GCGAGCAGGT CGAAAGCGTC GTGCAGCTGA TCCGCCCGCT GGTCGGCAGC
CGGATCCAGA TCGAGCTCGC GGTGACCGAG ACCAGCCTGT TCACCTTGGC CGACATCGCG
CAATTCCAGA CCGCGCTGAT CAACCTCGCC GTGAACGCGC GCGACGCCAT GAATGGCGAG
GGACGCCTTA CGATCAGCAT GCGCAGCACC GACACGCTGC CGGCGCTTCG CGGCCAGAGC
GCACGACCCG GCGCCTTCAT CGCGATCTCC GTCGCCGACA CCGGCGCCGG CATTGCGCCC
CAGCATCTCA ACGCGATCTT CGAGCCGTTC TTCACCACCA AGGAGGTGGG CAAGGGCACC
GGCCTCGGCC TCAGCCAGGC CTTCGGCTTC GCCAAGCAGT CGGAAGGCGA TATCGCGGTC
GAGAGCCGGC TCGGCCAGGG CGCGACCTTC ACGATCTATC TGCCGCAGGC GGCGGCACCG
CAATCCGGTC CGGAGGCCGG ACATGCGCGC AGCGAGCCCG CCACCATCGG CCGCGGCTAT
CGCGTGCTCG TGGTCGAGGA CAATGACGAG GTTGGCCAGT TCTCCACCGA GCTGCTCGAG
GACCTCGGCT ATGTCACGCG CCGCGTCGCC AACGCCCATG ATGCGCTGGC GATCCTGGAG
ACCGACGAGT TTGCTGTCGA CCTGGTGTTT TCCGACGTCA TCATGCCCGG CATCAACGGC
CTCGAACTCG CCGGCATCAT CCGCGACCGC TATCCCGGCC TGCCCGTCGT GCTCACGTCA
GGCTACAGCC ACGTGCTGGC GGAAAACGCC CATCACGGCT TTGAGCTGAT CAAGAAGCCC
TATTCGGTCG AGTCGCTGTC ACGTATCCTG CGCAAGGCGA TGGCCGAGAA GGCGCCGCTG
CCGCGGTGA
 
Protein sequence
MNSADAPRDE VVPDIAGAAA LRQHIEEIAR DRDQAYRALQ EREAELARIQ RIARVGGVEV 
DLREGFRNRR SPEYLIIHGL PEEAANETHE DWVNRVHPDD RIKAEQDFIA AVNSKQEDYT
TEYRIIRPSD GEIRWIRVIA RIERDWNGRA IRLVGAHIDV TDQMLAQAKL RESEERFRLI
ADSAPVPIWL TRLDRTRSFV NRAYVDFLGL SHDEALAFDW RKALHPEDLP RILAQQQTGE
CSLKPFFLEA RYRRADGHWR WLRSESQPRW DANGQHIGFI GVAHDVTAAK QGEIELRRIN
ETLEERIRER TAQLEANEAR MRAIFDTSNQ YQAILDTEGR ITHVNRIAVD GMRAGGVDVI
GHPLWDAPWF VHTPGVSEML RKAFARVLAG DSFRTEVRLD FANGDRHFEL SMRPLFDQHD
AIMGAVAEAV DITERIQGEE LLRQSQKMEA VGQLTGGVAH DFNNLLTIIR SATDFLRRRD
LPEERRRRYV DAISETVERA SKLTGQLLAF ARRQPLTPQV FNVGEQVESV VQLIRPLVGS
RIQIELAVTE TSLFTLADIA QFQTALINLA VNARDAMNGE GRLTISMRST DTLPALRGQS
ARPGAFIAIS VADTGAGIAP QHLNAIFEPF FTTKEVGKGT GLGLSQAFGF AKQSEGDIAV
ESRLGQGATF TIYLPQAAAP QSGPEAGHAR SEPATIGRGY RVLVVEDNDE VGQFSTELLE
DLGYVTRRVA NAHDALAILE TDEFAVDLVF SDVIMPGING LELAGIIRDR YPGLPVVLTS
GYSHVLAENA HHGFELIKKP YSVESLSRIL RKAMAEKAPL PR