Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4905 |
Symbol | |
ID | 5149642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5143653 |
End bp | 5146121 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640559703 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001240833 |
Protein GI | 148256248 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.28937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG CGGACGCGCC ACGAGACGAA GTCGTCCCCG ATATTGCCGG CGCGGCCGCG TTGCGCCAGC ATATTGAGGA GATCGCGCGC GATCGCGACC AGGCCTATCG AGCGCTGCAG GAGCGCGAGG CCGAGCTGGC ACGCATCCAG CGCATCGCGC GGGTCGGCGG CGTCGAGGTC GATCTCCGGG AAGGCTTTCG CAACCGCCGC TCACCCGAAT ACCTGATCAT TCACGGCCTG CCAGAAGAGG CTGCCAACGA GACCCACGAG GACTGGGTCA ACCGGGTGCA TCCTGACGAT CGCATCAAGG CCGAGCAGGA CTTCATCGCC GCGGTCAACA GCAAGCAGGA AGACTACACC ACCGAATACC GCATCATCCG GCCGAGCGAC GGCGAGATCC GCTGGATCCG CGTCATCGCC CGCATCGAGC GCGACTGGAA CGGTCGTGCC ATCCGCCTGG TCGGCGCGCA TATCGACGTC ACCGACCAGA TGCTCGCACA GGCCAAGCTG CGCGAGAGCG AGGAGCGCTT CCGGCTGATC GCCGACAGCG CGCCGGTGCC GATCTGGCTG ACAAGGCTCG ACCGCACCCG CTCCTTCGTC AATCGCGCCT ATGTCGATTT CCTCGGCCTG TCTCACGACG AGGCGCTCGC CTTCGACTGG CGCAAGGCGC TGCATCCCGA GGACCTGCCG CGCATTCTTG CCCAGCAGCA GACGGGCGAG TGCTCGCTGA AGCCGTTCTT CCTCGAGGCG CGCTATCGAC GGGCCGACGG GCATTGGCGC TGGCTGCGCT CGGAGTCGCA GCCACGCTGG GACGCCAACG GCCAGCACAT CGGCTTCATC GGCGTCGCCC ATGACGTGAC CGCCGCCAAG CAAGGCGAGA TCGAGCTCCG CCGTATCAAC GAGACGCTGG AAGAGCGCAT CCGGGAGCGG ACCGCGCAGC TCGAAGCCAA TGAGGCGCGG ATGCGCGCCA TCTTCGACAC CAGCAATCAG TATCAGGCCA TCCTCGACAC CGAGGGCAGG ATCACGCATG TCAACCGCAT CGCGGTCGAC GGCATGCGCG CCGGCGGCGT CGATGTCATC GGCCATCCGC TGTGGGACGC GCCCTGGTTC GTGCACACGC CCGGCGTGAG CGAGATGCTG CGCAAGGCGT TTGCGCGGGT GCTCGCCGGC GACAGCTTCC GCACCGAGGT GCGGCTCGAC TTCGCCAATG GCGACCGCCA CTTCGAACTG TCGATGCGGC CGCTGTTCGA CCAGCATGAT GCGATCATGG GCGCGGTCGC CGAAGCCGTC GACATCACCG AGCGCATCCA GGGCGAGGAG CTGCTGCGGC AATCCCAGAA GATGGAGGCG GTCGGCCAGC TCACCGGCGG CGTCGCGCAC GACTTCAACA ATCTGCTCAC GATCATCCGC TCGGCCACCG ACTTCCTGCG CCGCCGCGAT CTGCCGGAAG AACGGCGACG GCGCTATGTC GACGCGATCT CGGAGACGGT GGAGCGGGCC TCGAAGCTCA CCGGGCAGCT CCTGGCGTTC GCGCGCCGGC AGCCGCTGAC GCCGCAGGTG TTCAATGTCG GCGAGCAGGT CGAAAGCGTC GTGCAGCTGA TCCGCCCGCT GGTCGGCAGC CGGATCCAGA TCGAGCTCGC GGTGACCGAG ACCAGCCTGT TCACCTTGGC CGACATCGCG CAATTCCAGA CCGCGCTGAT CAACCTCGCC GTGAACGCGC GCGACGCCAT GAATGGCGAG GGACGCCTTA CGATCAGCAT GCGCAGCACC GACACGCTGC CGGCGCTTCG CGGCCAGAGC GCACGACCCG GCGCCTTCAT CGCGATCTCC GTCGCCGACA CCGGCGCCGG CATTGCGCCC CAGCATCTCA ACGCGATCTT CGAGCCGTTC TTCACCACCA AGGAGGTGGG CAAGGGCACC GGCCTCGGCC TCAGCCAGGC CTTCGGCTTC GCCAAGCAGT CGGAAGGCGA TATCGCGGTC GAGAGCCGGC TCGGCCAGGG CGCGACCTTC ACGATCTATC TGCCGCAGGC GGCGGCACCG CAATCCGGTC CGGAGGCCGG ACATGCGCGC AGCGAGCCCG CCACCATCGG CCGCGGCTAT CGCGTGCTCG TGGTCGAGGA CAATGACGAG GTTGGCCAGT TCTCCACCGA GCTGCTCGAG GACCTCGGCT ATGTCACGCG CCGCGTCGCC AACGCCCATG ATGCGCTGGC GATCCTGGAG ACCGACGAGT TTGCTGTCGA CCTGGTGTTT TCCGACGTCA TCATGCCCGG CATCAACGGC CTCGAACTCG CCGGCATCAT CCGCGACCGC TATCCCGGCC TGCCCGTCGT GCTCACGTCA GGCTACAGCC ACGTGCTGGC GGAAAACGCC CATCACGGCT TTGAGCTGAT CAAGAAGCCC TATTCGGTCG AGTCGCTGTC ACGTATCCTG CGCAAGGCGA TGGCCGAGAA GGCGCCGCTG CCGCGGTGA
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Protein sequence | MNSADAPRDE VVPDIAGAAA LRQHIEEIAR DRDQAYRALQ EREAELARIQ RIARVGGVEV DLREGFRNRR SPEYLIIHGL PEEAANETHE DWVNRVHPDD RIKAEQDFIA AVNSKQEDYT TEYRIIRPSD GEIRWIRVIA RIERDWNGRA IRLVGAHIDV TDQMLAQAKL RESEERFRLI ADSAPVPIWL TRLDRTRSFV NRAYVDFLGL SHDEALAFDW RKALHPEDLP RILAQQQTGE CSLKPFFLEA RYRRADGHWR WLRSESQPRW DANGQHIGFI GVAHDVTAAK QGEIELRRIN ETLEERIRER TAQLEANEAR MRAIFDTSNQ YQAILDTEGR ITHVNRIAVD GMRAGGVDVI GHPLWDAPWF VHTPGVSEML RKAFARVLAG DSFRTEVRLD FANGDRHFEL SMRPLFDQHD AIMGAVAEAV DITERIQGEE LLRQSQKMEA VGQLTGGVAH DFNNLLTIIR SATDFLRRRD LPEERRRRYV DAISETVERA SKLTGQLLAF ARRQPLTPQV FNVGEQVESV VQLIRPLVGS RIQIELAVTE TSLFTLADIA QFQTALINLA VNARDAMNGE GRLTISMRST DTLPALRGQS ARPGAFIAIS VADTGAGIAP QHLNAIFEPF FTTKEVGKGT GLGLSQAFGF AKQSEGDIAV ESRLGQGATF TIYLPQAAAP QSGPEAGHAR SEPATIGRGY RVLVVEDNDE VGQFSTELLE DLGYVTRRVA NAHDALAILE TDEFAVDLVF SDVIMPGING LELAGIIRDR YPGLPVVLTS GYSHVLAENA HHGFELIKKP YSVESLSRIL RKAMAEKAPL PR
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