| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4862 |
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| Symbol | |
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| ID | 5154540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5105837 |
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| End bp | 5106820 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640559660 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_001240791 |
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| Protein GI | 148256206 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.400673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.659782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAGA TCAACACGCG CACCACCCTT CTGCAGCCGG AAGCCGACAC GCAGCCGATC
GCCGTCTCGG CCGAAGTCAG CCCGTCGTCC TGGCCGAACC TGCACGCCGC CGACACCCAT
GTCGTCAGCG CGACCAGCCA CAATATTCGC CGCCTGACCG TGCTCCGCCT GCTGCGCAAT
CCCTCCGTCG CCGCCGGCGG CGCGCTGCTG TCGCTGATCA TCATCGCGGC AGCACTGGCG
CCCTTTCTGT ATCCCGGCGA TCCGCTCTCG ATGGTGGCGC GGCCGCTGCT GTGGCCGGGC
CAGAATGCGG CGTTTCCGTT CGGCACCGAC TCGCTCGGCC GCGATGTCGC CGCTGGCCTG
TTCCATGGCG CGCGGGTGTC GCTCCTGATC GGCGTCGTGG CCACCTCGAT CGGCGTCAGC
GTCGGCATCC TCGTCGGCGC CACCGCGGGC TATCGCGGCG GCTGGATCGA CGATGTGCTG
GTCCGCGTGA TCGAGCTGTT CCAGACCGTG CCGAGCTTCA TCCTGCTGGT CGTGCTGGTC
GCGATCGCGC AGCCGTCGAT CCTCACCGTG ACCTGGGCGA TCGGTCTCGT CACCTGGCCG
ACCATCGCGC GGCTCGTGCG GGCCGAATTC CGCGTGCTGC GCGAGAAGGA TTTCGTGATG
GCCGCGCGCA GCCTCGGCTT CGGCCATGGC CGCATCGTGA TCCGCGAGAT CCTGCCGAAC
GCCCTGCCGG CGATCATCGT CACAGCGTCC GTTATGGTCG CCACCGCGAT CCTGATGGAG
GCCGCGCTGT CGTTCCTCGG GCTCGGCGAT CCCAACGTCG TCAGCTGGGG CAGCATGATC
GGCTCCGGGC GCGAGCTGAT CCGCACTGCC TGGTATCTCA CCGCTTTGCC CGGCGTGGTC
ATCGTGCTGA CCGTGCTGGC GCTGAACCTG ATCGGCGATG GCCTGACCGA CGTGCTCAAT
CCGCGCACCG GCGTGGAGCG CTGA
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| Protein sequence | MLQINTRTTL LQPEADTQPI AVSAEVSPSS WPNLHAADTH VVSATSHNIR RLTVLRLLRN
PSVAAGGALL SLIIIAAALA PFLYPGDPLS MVARPLLWPG QNAAFPFGTD SLGRDVAAGL
FHGARVSLLI GVVATSIGVS VGILVGATAG YRGGWIDDVL VRVIELFQTV PSFILLVVLV
AIAQPSILTV TWAIGLVTWP TIARLVRAEF RVLREKDFVM AARSLGFGHG RIVIREILPN
ALPAIIVTAS VMVATAILME AALSFLGLGD PNVVSWGSMI GSGRELIRTA WYLTALPGVV
IVLTVLALNL IGDGLTDVLN PRTGVER
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